DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Zyx and ajuba

DIOPT Version :9

Sequence 1:NP_652015.1 Gene:Zyx / 317824 FlyBaseID:FBgn0011642 Length:585 Species:Drosophila melanogaster
Sequence 2:XP_701366.4 Gene:ajuba / 572549 ZFINID:ZDB-GENE-030131-9341 Length:688 Species:Danio rerio


Alignment Length:609 Identity:172/609 - (28%)
Similarity:250/609 - (41%) Gaps:154/609 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 SNNQNASVKRRLDIPPKPPIKYN-EMPQVPSSRQVLCSREPLYSQP-----------LIGVEKTM 90
            |.|..|::|:|         :|: |:.|:...:|:|....||.|.|           |..||.:.
Zfish   150 SPNSRAALKQR---------RYSLELQQLVRRQQLLAQPPPLSSVPPPYPTHSSAARLSAVEPSF 205

  Fly    91 RGHMPFRKYLSSEFGVADTQINRKTTLDNPAILEQQLEALAYHKL----QMEKKGLLGVQAKPTQ 151
            ...|...|.||.:                        |||.|.:|    :....|.....:.|.|
Zfish   206 LHEMERHKRLSLQ------------------------EALFYKRLSSGGEPWDSGRPASLSHPPQ 246

  Fly   152 -----PLNSFTKPLSKTLSKSLIYSNLGSVRKEIETLELLTDETKISASTYSNVNETAMDSSHSS 211
                 .:..|..|.:..||....:|               ..|:.:::...|..:.||.......
Zfish   247 RTHDSSVGGFFFPSAPALSPCSSFS---------------LQESVLASPRSSFASSTASGGGGGG 296

  Fly   212 TQKMLSVCTNFISDNEKDELPPPPSPESAVSSSYSELRHATLEFNKPIDYLQNNQTTNPLQIYAN 276
            ...|.|.|::              :..|.:|..|.. ||..    .|...||.:.|    |:...
Zfish   297 GSPMGSRCSS--------------NRTSGISLGYDN-RHTP----GPAQQLQLSST----QLSGT 338

  Fly   277 QYAMQHDATGKSSSTYDSIYEPINPRPCV----ADTLPRESY----NLHNSYVNDNNPN---ISH 330
            .....|.|.||:.:....::     |.|:    .|:  |.||    :.|....:...|:   |..
Zfish   339 TLGQAHPAPGKTGAPPIEVW-----RDCLEGVSGDS--RHSYPPALSTHTVTFHRAEPDWGPIDQ 396

  Fly   331 EYNISNSIEANQTLYIHGNARTTFY--DVNSIHRNDK----EGLKNYISI--------------- 374
            ..:..:.:.....   |.:...|.|  ::..:...|.    |.|...:::               
Zfish   397 RGSRGDGVGERAR---HSDLLGTRYQQELTRLLLRDAALEGEALLGGLTLKEQPVSATILPSSTS 458

  Fly   375 -----------PTEP---VQELENYGRCVKCNSRVLGESSGCTAMDQIYHIFCFTCTDCQINLQG 425
                       |.||   |...|.:|.||||...|.|..:.|.|:|.:||..||||..|...|:.
Zfish   459 TPAPTAAPGKPPEEPAAGVDRQEYFGTCVKCGKGVYGADNACQALDSLYHTRCFTCVSCGRTLRN 523

  Fly   426 KPFYALDGKPYCEYDYL-----QTLEKCSVCMEPILERILRATGKPYHPQCFTCVVCGKSLDGLL 485
            |.||.::|..||:.||:     :..||||||...|||:||:|.|..|||.||.|.||.|:|||:.
Zfish   524 KDFYNVNGSVYCKEDYMFSGFQEAAEKCSVCGHLILEQILQALGNSYHPGCFRCTVCSKALDGVP 588

  Fly   486 FTVDATNQNYCITDFHKKFAPRCCVCKQPIMPDPGQEETIRVVALDRSFHLECYKCEDCGLLLSS 550
            ||||..|..||::|:::.|||:|..|.|||:|..|.||.:|||::::.:|.|||.||:||..||.
Zfish   589 FTVDYLNNVYCVSDYNRTFAPKCAACLQPILPAEGSEEILRVVSMNKDYHFECYHCEECGKQLSD 653

  Fly   551 EAEGRGCYPLDDHVLCKSCNAKRV 574
            | .|..|:|||.|:||.||:..||
Zfish   654 E-PGSQCFPLDAHLLCHSCHMSRV 676

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZyxNP_652015.1 LIM1_LPP 388..441 CDD:188737 23/52 (44%)
LIM2_LPP 448..507 CDD:188740 33/58 (57%)
LIM3_LPP 508..575 CDD:188821 35/67 (52%)
ajubaXP_701366.4 LIM1_Ajuba_like 486..539 CDD:188738 23/52 (44%)
LIM2_Ajuba_like 551..603 CDD:188741 30/51 (59%)
LIM3_Ajuba_like 611..672 CDD:188822 32/61 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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