DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Zyx and zyx

DIOPT Version :9

Sequence 1:NP_652015.1 Gene:Zyx / 317824 FlyBaseID:FBgn0011642 Length:585 Species:Drosophila melanogaster
Sequence 2:XP_005157983.1 Gene:zyx / 564246 ZFINID:ZDB-GENE-070928-18 Length:608 Species:Danio rerio


Alignment Length:537 Identity:156/537 - (29%)
Similarity:236/537 - (43%) Gaps:87/537 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 PPKPPIKYNEMPQVPS-----SRQVLCSREPLYSQPLIGVEKTMRGHM----PFRKYLSSEFGVA 107
            ||.||      |.||.     :.|.|..::..:.:.| |....|...|    ||...|.|:|..|
Zfish   138 PPPPP------PPVPENGAGINSQRLFEKQTSFDKQL-GSLTDMLSEMETSGPFNPKLPSQFSSA 195

  Fly   108 DTQINRKTTLDNPAILEQQLEALAYHKLQMEKKGLLGVQAKPTQPLNSFTKPLSKTLSKSLIYSN 172
            ...  :......|...:..|..|...:||....     .|...:.|.:.|:|.:  ||.:.:.:.
Zfish   196 PAP--KPAPGPPPTAPKPALSFLPPPELQDHPS-----PAPWAEELRARTRPAN--LSTASVPAP 251

  Fly   173 LGSVRKEIETLELLTDETKISASTY-SNVNETAMDSSHSSTQKMLSVCTNFISDNEKDELPPPP- 235
            :.||.|.    ..:..:|....|.. ||:....:..:.|...:..:   :.:....:...|||| 
Zfish   252 VQSVAKG----PAVAPKTNFPPSQLNSNLASKTVSPAPSGGARGFN---HTVKSPPQSTFPPPPP 309

  Fly   236 -SPESAVSSSYSELRHATLEFNKPIDYLQNNQTTNPLQIYANQYAMQHDATGKSSSTYDSIYEPI 299
             :|.:.:.        ......||   ..|:..|:|:              |...|     :.| 
Zfish   310 AAPPAPIP--------PPANIPKP---AFNHSETSPI--------------GSHQS-----FAP- 343

  Fly   300 NPRPCVADTLPRESYNLHNSYVNDNNPNISHEYNISNSIEANQTLYIHGNARTTFYDVNSIHRND 364
             |.|....|.|..::         |.|..:   |:.:.:..:.|....|.|..|..:|..:.:..
Zfish   344 -PSPAAPKTSPVSTF---------NRPAGN---NVPSKVSGSGTGSGPGGAPLTMREVEELEKMT 395

  Fly   365 KEGLKNYISIP---TEPVQELENYGRCVKCNSRVLGESSGCTAMDQIYHIFCFTCTDCQINLQGK 426
            |:.:::....|   |.|..|:     |.||...:........|||:::|..||.|..||..|||.
Zfish   396 KDFIQHMDKHPPVITSPATEV-----CGKCGETLSRSQPAVRAMDKLFHSHCFCCVSCQRPLQGM 455

  Fly   427 PFYALDGKPYCEYDYLQTLEKCSVCMEPILERILRATGKPYHPQCFTCVVCGKSLDGLLFTVDAT 491
            .||..||.|.||..|:.:|..||.|.|.|.:|:|:|.|:.:|..||.|..|..||:|..|..|..
Zfish   456 QFYDRDGTPQCEECYMSSLSVCSRCGERITDRVLKAMGQCFHAHCFLCTTCNCSLEGAPFITDDD 520

  Fly   492 NQNYCITDFHKKFAPRCCVCKQPIMPDPGQEETIRVVALDRSFHLECYKCEDCGLLLSSEAEGRG 556
            |:.||:.|:|::|:|.|..|.:||:||||.|||:|||||:::|||:||:||||...||.||:..|
Zfish   521 NKPYCVKDYHRRFSPLCVSCNEPIIPDPGSEETVRVVALEKNFHLKCYRCEDCARPLSIEADADG 585

  Fly   557 CYPLDDHVLCKSCNAKR 573
            ||||:..:||..|:.:|
Zfish   586 CYPLNGKILCMKCHTQR 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZyxNP_652015.1 LIM1_LPP 388..441 CDD:188737 22/52 (42%)
LIM2_LPP 448..507 CDD:188740 25/58 (43%)
LIM3_LPP 508..575 CDD:188821 38/66 (58%)
zyxXP_005157983.1 LIM 383..470 CDD:295319 29/91 (32%)
LIM 477..535 CDD:295319 25/57 (44%)
LIM3_Zyxin 537..603 CDD:188819 38/66 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001663
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.810

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