DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zyx and lmo7b

DIOPT Version :9

Sequence 1:NP_652015.1 Gene:Zyx / 317824 FlyBaseID:FBgn0011642 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_001038909.2 Gene:lmo7b / 558333 ZFINID:ZDB-GENE-060825-242 Length:1384 Species:Danio rerio


Alignment Length:532 Identity:94/532 - (17%)
Similarity:165/532 - (31%) Gaps:202/532 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 QPLIGV-EKTMRGHM-----PFRKYLSSEFGVADTQINRKTTLDNPAILEQQLEALAYHKLQMEK 139
            ||..|| .|.|.|.:     ..|....||..::|.|:...:|..:....:.:.|.....|.|||:
Zfish   968 QPANGVLSKMMNGSIQDNAAAVRNKGGSESDISDLQVPSISTTSSSWSWDHEEERRRQEKWQMEQ 1032

  Fly   140 KGLLGVQAKPTQPLNSFTKPLSKTLSKSLIYSNLGSVRKEIETL--ELLTDETKISASTYSNVNE 202
            :.||  |.|                           .|::.|.|  |....:.::....|..:.|
Zfish  1033 ERLL--QEK---------------------------YRRDQEKLEEEWRRAQQEVYGEEYCGLEE 1068

  Fly   203 TAMDSSHSSTQKMLSVCTNFISDNEKDELPPPPSPESAVSSSYSELRHATLEFNKPIDYLQNNQT 267
                      ||.|.|.:|   .|......||...:|:.:.|        :.||:.:...||.|.
Zfish  1069 ----------QKTLDVLSN---GNPAPHNSPPFYNQSSATFS--------VTFNENVAAAQNRQA 1112

  Fly   268 TNPLQIYANQYAMQ-------------------------HDAT-GKSSSTYDSIYEPINPRPC-- 304
            .  :|..|...:::                         .|.| .||:...:::::......|  
Zfish  1113 C--VQTAAGHQSIKAEDKCDSPTKTLCSEESYGFAKLTVSDRTKSKSTPALEALHKQDAKEGCSK 1175

  Fly   305 --------------VADTLPRESYNLH--NSYVNDNNPNISHEYNISNSIEANQTLYIHGNARTT 353
                          :.|.: |:...||  :|::...|.:|:.|           |:.: |.:...
Zfish  1176 KKGQLSQAEKERLQILDEM-RKKTPLHTDSSWIRQRNASINKE-----------TITV-GTSIRR 1227

  Fly   354 FYDVNSIHRNDKEGLKNYIS-IPTEPVQELENYGRCVKCNSRVLGESS---GCTAMDQIYHIFCF 414
            :..::::|..:....::|.| :.:.|...|.:.|      |...|.||   |.........:...
Zfish  1228 YESMDNLHTTNSWSRQSYTSGLSSRPHSALGSSG------SYRSGRSSLGPGSAIFSTGVKLNSN 1286

  Fly   415 TCTDCQINLQGKPFYALDGKPYCEYDYLQTLEKCSVCMEPILERILRATGKPYHPQCFTCVVCGK 479
            |.|.....|:.:|.....|:                                        :|.|:
Zfish  1287 TTTPEPPGLESRPNSQQQGR----------------------------------------LVSGR 1311

  Fly   480 SLDGLLFTVDATNQNYCITDFHKKFAPRCCVCKQPIMPDPGQEETIRVVALDRSFHLECYKCEDC 544
            .:                          |..|:||:    |:...:.:.:|:..||:.|:||..|
Zfish  1312 RM--------------------------CSRCEQPL----GKGAAMVIDSLELCFHIGCFKCVSC 1346

  Fly   545 GLLLSSEAEGRG 556
            ...|     |||
Zfish  1347 RTEL-----GRG 1353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZyxNP_652015.1 LIM1_LPP 388..441 CDD:188737 10/55 (18%)
LIM2_LPP 448..507 CDD:188740 2/58 (3%)
LIM3_LPP 508..575 CDD:188821 16/49 (33%)
lmo7bNP_001038909.2 CH 16..129 CDD:237981
DUF4757 418..579 CDD:292571
PDZ_serine_protease <851..912 CDD:238487
SDP_N 1019..>1102 CDD:289079 26/132 (20%)
GBP_C <1019..1057 CDD:303769 13/66 (20%)
LIM 1314..1373 CDD:259829 16/49 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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