DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zyx and prickle1

DIOPT Version :9

Sequence 1:NP_652015.1 Gene:Zyx / 317824 FlyBaseID:FBgn0011642 Length:585 Species:Drosophila melanogaster
Sequence 2:XP_012814522.1 Gene:prickle1 / 549693 XenbaseID:XB-GENE-486941 Length:871 Species:Xenopus tropicalis


Alignment Length:391 Identity:86/391 - (21%)
Similarity:138/391 - (35%) Gaps:117/391 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   236 SPESAVSSSYSELRHATLEFNKPIDYLQNNQTTNPLQIYANQYAMQHDATGKSSSTYDS------ 294
            ||..:|||.            :.||.|:...||..:.:..:|...:|....:.|||.|.      
 Frog    16 SPWKSVSSP------------RAIDELERPITTVYMPLEMDQKISKHTFGCQRSSTSDDDSGCAM 68

  Fly   295 ---IYEPINPRP--------CVADT-LPRESYNLHNSYVNDNNPNISHEYNISNSIEANQTLY-- 345
               .:.|...||        |:.:. :|         |||          ::.......|.||  
 Frog    69 EEYTWVPPGLRPEQVQLYFACLPEAKVP---------YVN----------SVGEKCRIKQLLYQL 114

  Fly   346 -IHGNARTTFYDV---NSIHRNDKEGLKNYISIPTEPVQELENYGR--------------CVKCN 392
             .|.|      :|   .|:...:|:.|:.:     ...::.|..||              |.||.
 Frog   115 PPHDN------EVRYCQSLSEEEKKELQMF-----SAQRKKEALGRGNIKMLSRAVMHAMCEKCG 168

  Fly   393 SRVLG-------ESSG---CTAMDQIYHIFCFTCTDCQINLQGKPFYALDGKPYCEYDYLQTLE- 446
            .::.|       ..:|   |      :|..||.|:.|...|....::..|||.:|...:.:.|: 
 Frog   169 EKINGGEIAIFVSRAGPGVC------WHPSCFVCSTCNELLVDLIYFYQDGKIHCGRHHAELLKP 227

  Fly   447 KCSVCMEPIL-ERILRATGKPYHPQCFTCVVCGKSLDGLLFTVDATNQNYCITDFHKKFAPRCCV 510
            :||.|.|.|. :....|.|:.:|...|:|..|...|.|..: :....:.:|...|...:|..|..
 Frog   228 RCSACDEIIFADECTEAEGRHWHMNHFSCYECETVLGGQRY-IMKDGRPFCCGCFESHYAEYCES 291

  Fly   511 CKQPIMPDPGQEETIRVVALD-RSFHL--ECYKCEDCGLLLSSEAEGRGC--YPLDDHVLC-KSC 569
            |.:.|..|..|      :..| :.:|.  .|:.|..|.:.|      .||  .|....:.| |:|
 Frog   292 CGEHIGVDHAQ------MTYDGQHWHATETCFSCAQCKVSL------LGCPFLPKKGRIYCSKAC 344

  Fly   570 N 570
            :
 Frog   345 S 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZyxNP_652015.1 LIM1_LPP 388..441 CDD:188737 16/62 (26%)
LIM2_LPP 448..507 CDD:188740 16/59 (27%)
LIM3_LPP 508..575 CDD:188821 17/69 (25%)
prickle1XP_012814522.1 PET_Prickle 60..156 CDD:193602 21/125 (17%)
LIM1_Prickle 164..222 CDD:188799 16/63 (25%)
LIM2_Prickle 227..282 CDD:188802 14/55 (25%)
LIM3_Prickle 287..345 CDD:188804 16/69 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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