DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Zyx and pk

DIOPT Version :9

Sequence 1:NP_652015.1 Gene:Zyx / 317824 FlyBaseID:FBgn0011642 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_724538.1 Gene:pk / 45343 FlyBaseID:FBgn0003090 Length:1299 Species:Drosophila melanogaster


Alignment Length:719 Identity:151/719 - (21%)
Similarity:240/719 - (33%) Gaps:199/719 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SLPKG---DTGSPLVCIGHGKVAKLVAKISNNQNASVKRRLDIPPKPPIKYNEMPQVPSSRQVLC 73
            |.|||   ..|.||  ..|....:...|:..:..|.| |...:|.......||..:|....    
  Fly   126 STPKGGATTAGRPL--FPHSSSPRRSKKLLRSLRAHV-RGEKLPKNDTTTANESSEVTQRN---- 183

  Fly    74 SREPLYSQP-LIGVEKTMRGHMPFR--KY--LSSEFGVADTQINRKTTLDNPAILEQQLEALAYH 133
            :|..:...| |.|::....|.:..|  :|  |.:...:|.....::.|.....|:||:.|:....
  Fly   184 ARVTVLDDPFLFGIDADHLGDLVVRGKRYSTLDATENMARFYAEQEATAQVLEIIEQEEESPEQE 248

  Fly   134 ----KLQMEKKGLLGVQAKPTQPLNSFTK-----------PLSKTLSKSLIYSNLGSVR------ 177
                .|..::|....|...|..|.|..|:           ||....:..|.:.|| |:|      
  Fly   249 APKPALPPKQKQQRPVPPLPPPPANRVTQDQGTQPAAPQVPLQPLTAGDLQFLNL-SLRQRSLPR 312

  Fly   178 -----KEIETLELLTDETKISASTYSNVNETAMDSSH----------SSTQKMLSVCTNFISDNE 227
                 |:...:....:|...||...........:|:.          |..||:.::..:|....:
  Fly   313 SMKPFKDAHDISFTFNELDTSAEPEVATGAAQQESNEPISRTPLTQISYLQKIPTLPRHFSPSGQ 377

  Fly   228 KDELPPP--------PSPESAVSSSYSELRHATLEFNKPIDYLQNNQ------------------ 266
            ....||.        ||..|| |:.|:....|.:....|:. ||.:|                  
  Fly   378 GLATPPALGSGGMGLPSSSSA-SALYAAQAAAGILPTSPLP-LQRHQQYLPPHHQQHPGAGMGPG 440

  Fly   267 -------------------TTNPLQIYANQY----------------------AMQHDATGKSSS 290
                               :.||.  |:|..                      .:.|.|.|.||:
  Fly   441 PGSGAAAGPPLGPQYSPGCSANPK--YSNAQLPPPPHHHHQLSPALSTPSPPSLLHHPAGGTSSA 503

  Fly   291 TYDSIYEPINPRP---------------C-------VADTLPRESYNLHNSYVND------NNPN 327
               |.:.|....|               |       |...|..:...|:.|.:.|      |:| 
  Fly   504 ---SAHAPFLGGPHMDMQRQSHSDDDSGCALEEYTWVPPGLRPDQVRLYFSQIPDDKVPYVNSP- 564

  Fly   328 ISHEYNISNSIEA-----NQTLYIHG---NARTTFYDVNSIHRNDKEGLKNYISIPTEPVQELEN 384
             ..:|.:...:..     |:..|.|.   ..|......::..:.|..|..|        |::|.:
  Fly   565 -GEQYRVRQLLHQLPPHDNEVRYCHSLTDEERKELRLFSTQRKRDALGRGN--------VRQLMS 620

  Fly   385 YGRCVKCNSRVLGESSGCTAM-------DQIYHIFCFTCTDCQINLQGKPFYALDGKPYCEYDYL 442
            ...|..|:..:   |:|..|:       :..:|..||.|:.|:..|....::..||:.||...:.
  Fly   621 ARPCDGCDDLI---STGDIAVFATRLGPNASWHPACFACSVCRELLVDLIYFHRDGRMYCGRHHA 682

  Fly   443 QTLE-KCSVCMEPIL-ERILRATGKPYHPQCFTCVVCGKSLDGLLFTVDATNQNYCITDFHKKFA 505
            :||: :||.|.|.|| :....|.|:.:|...|.|..|.|.|.|..: :....:.||:..|...||
  Fly   683 ETLKPRCSACDEIILADECTEAEGRAWHMNHFACHECDKQLGGQRY-IMREGKPYCLHCFDAMFA 746

  Fly   506 PRCCVCKQPIMPDPGQEETIRVVALD-RSFHL--ECYKCEDCGLLLSSEAEGRGCYPLDDHVLCK 567
            ..|..|.:.|..|.||      ::.| :.:|.  ||:.|..|...|.    ||...|....:.|.
  Fly   747 EYCDYCGEAIGVDQGQ------MSHDGQHWHATDECFSCNTCRCSLL----GRAFLPRRGAIYCS 801

  Fly   568 -SCN 570
             :|:
  Fly   802 IACS 805

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZyxNP_652015.1 LIM1_LPP 388..441 CDD:188737 15/59 (25%)
LIM2_LPP 448..507 CDD:188740 20/59 (34%)
LIM3_LPP 508..575 CDD:188821 18/67 (27%)
pkNP_724538.1 PET_Prickle 523..618 CDD:193602 17/104 (16%)
LIM1_Prickle 624..682 CDD:188799 15/60 (25%)
LIM2_Prickle 687..742 CDD:188802 17/55 (31%)
LIM3_Prickle 747..805 CDD:188804 17/67 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.