DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zyx and pdlim7

DIOPT Version :9

Sequence 1:NP_652015.1 Gene:Zyx / 317824 FlyBaseID:FBgn0011642 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_957134.1 Gene:pdlim7 / 393813 ZFINID:ZDB-GENE-040426-2092 Length:419 Species:Danio rerio


Alignment Length:447 Identity:96/447 - (21%)
Similarity:146/447 - (32%) Gaps:126/447 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 AYHKLQMEKKGLL---GVQAK----PTQPLNSFTKPLSKTLSKSLIYSNLGSVRKEIETLELLTD 188
            |:|....|:|..|   ..|.|    |:..:|...:|.|.:...    .:.|.|.|.:        
Zfish    84 AFHPAGGEQKDSLTSSSSQPKYSFAPSTAINKMARPFSASPGS----GSAGPVIKPV-------- 136

  Fly   189 ETKISASTYSNVNETAMDSSHSSTQKMLSVCTNFISDNEKDELPPPPSPESAVSSSYSELRHATL 253
                     |...:.|:.|.|:.  ..::.|...:.....|:.....:|..|..||....|...:
Zfish   137 ---------SYALKPALSSPHNG--HGVAPCPVTVKSKPADKHDAVQAPAKAPVSSGPACRPPWV 190

  Fly   254 EFNKPIDYLQNNQTTNPLQIYANQYAMQHDATGKSSSTYDSIYEPINPRPCVADTLPRESYNLHN 318
                          |:|  .:|::|   |  ..|||:......:|:.|.|.              
Zfish   191 --------------TDP--GFADRY---H--PDKSSTVVTQHTQPLQPTPM-------------- 220

  Fly   319 SYVNDNNPNISHEYNISNSIEANQTLYIHGNARTTFYDVNSIHRNDKEGLKNYISIPTEPVQELE 383
                         .|.|:.::|.|....|.:..|..                             
Zfish   221 -------------QNRSSILQAAQQSPAHSSTATPL----------------------------- 243

  Fly   384 NYGRCVKCNSRVLGESSGCTAMDQIYHIFCFTCTDCQINLQGKPFYALDGKPYCE--YDYLQTLE 446
                |..|:..:.|..  ..|:.:.:|...|.|..|:..|....|:...|..||.  ||...: .
Zfish   244 ----CAACSKIIRGRY--VVALGRSWHPEEFMCCQCKRLLDEGGFFEEKGSIYCSKCYDNRYS-P 301

  Fly   447 KCSVCMEPILERILRATGKPYHPQCFTCVVCGKSLDGLLFTVDATNQNYCITDFHKKFAPRCCVC 511
            .|:.|.:.|...|:.|....||.|||.|..|...:....|.:: ..:.||..|:.|.|..:|..|
Zfish   302 NCAKCKKIITGEIMHALKMTYHVQCFLCAACKLPIRNQAFYME-EGEPYCERDYEKMFGTKCHGC 365

  Fly   512 KQPIMPDPGQEETIRVVALDRSFHLECYKCEDCGLLLSSEAEGRGCYPLDDHVLCKS 568
            ...|  |.|..   .:.||..|:|..|:.|..|.:.|    ||:..|...|..||||
Zfish   366 DFKI--DAGDR---FLEALGYSWHDTCFVCAICQINL----EGKTFYSKKDKPLCKS 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZyxNP_652015.1 LIM1_LPP 388..441 CDD:188737 14/54 (26%)
LIM2_LPP 448..507 CDD:188740 18/58 (31%)
LIM3_LPP 508..575 CDD:188821 21/61 (34%)
pdlim7NP_957134.1 PDZ_signaling 3..81 CDD:238492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 174..232 19/105 (18%)
LIM1_Enigma 244..295 CDD:188836 13/52 (25%)
LIM2_Enigma 303..354 CDD:188840 15/51 (29%)
LIM3_Enigma 362..416 CDD:188842 21/61 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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