DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zyx and prickle2b

DIOPT Version :9

Sequence 1:NP_652015.1 Gene:Zyx / 317824 FlyBaseID:FBgn0011642 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_899186.1 Gene:prickle2b / 368250 ZFINID:ZDB-GENE-030724-6 Length:840 Species:Danio rerio


Alignment Length:335 Identity:80/335 - (23%)
Similarity:129/335 - (38%) Gaps:63/335 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   270 PLQIYANQYAMQHDATGKSSSTYDS-----IYEPINPRPCVADTLPRESYNLHNSYVNDNNPNIS 329
            ||::......:.:|....|:|..||     .|..:.|     ...|.:.:..::|...|..|.::
Zfish     2 PLEMEKTVTKLMYDFQRNSTSDDDSGCALEEYAWVPP-----GLKPEQVHQYYSSLPEDKVPYVN 61

  Fly   330 ---HEYNISNSIEANQTLYIHGNARTTFYDVNSIHRNDKEGLKNYISIPTEPVQELENYGR---- 387
               .:|.|...:   ..|..|.| ...|  .||:...:|..||.:.:     .::.||.||    
Zfish    62 SPGEKYRIKQLL---HQLPPHDN-EVRF--CNSLDDEEKRELKLFSN-----QRKRENLGRGNVR 115

  Fly   388 ----------CVKCNSRVLGESSGCTAM----DQIYHIFCFTCTDCQINLQGKPFYALDGKPYCE 438
                      |.:|..::.|......|.    ...:|..||.|:.|...|....::..|||.:|.
Zfish   116 PFPVTMTGAICEQCGGQINGGDIAVFASRAGHGVCWHPQCFVCSMCDELLVDLIYFYQDGKIFCG 180

  Fly   439 YDYLQTLE-KCSVCMEPIL-ERILRATGKPYHPQCFTCVVCGKSLDGLLFTVDATNQNYCITDFH 501
            ..:.:.|: :||.|.|.|| :....|.|:.:|.:.|.|..|...|.|..: :....:.||.|.|.
Zfish   181 RHHAERLKPRCSACDEIILADECTEAEGRHWHMKHFCCFECETVLGGQRY-IMKEGRPYCCTCFE 244

  Fly   502 KKFAPRCCVCKQPIMPDPGQEETIRVVALD-RSFHL--ECYKCEDC--GLLLSSEAEGRGCYPLD 561
            ..:|..|..|.:.|..|.||      :..| :.:|.  .|:.|..|  .||      ||...|..
Zfish   245 SLYAEYCDSCGEHIGIDQGQ------MTYDGQHWHATEACFSCARCKKSLL------GRPFLPKQ 297

  Fly   562 DHVLC-KSCN 570
            ..:.| ::|:
Zfish   298 GQIFCSRACS 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZyxNP_652015.1 LIM1_LPP 388..441 CDD:188737 14/56 (25%)
LIM2_LPP 448..507 CDD:188740 19/59 (32%)
LIM3_LPP 508..575 CDD:188821 18/69 (26%)
prickle2bNP_899186.1 PET_Prickle 22..118 CDD:193602 24/111 (22%)
LIM1_Prickle 126..184 CDD:188799 14/57 (25%)
LIM2_Prickle 189..244 CDD:188802 17/55 (31%)
LIM3_Prickle 249..307 CDD:188804 17/69 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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