DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zyx and prickle1a

DIOPT Version :9

Sequence 1:NP_652015.1 Gene:Zyx / 317824 FlyBaseID:FBgn0011642 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_899185.2 Gene:prickle1a / 368249 ZFINID:ZDB-GENE-030724-5 Length:793 Species:Danio rerio


Alignment Length:345 Identity:82/345 - (23%)
Similarity:127/345 - (36%) Gaps:62/345 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   262 LQNNQTTNPLQIYANQYAMQHDATGKSSSTYDSIYEPINPRPCVA--DTLPRESYNLHNSYVNDN 324
            |......|.|.:...:.:...|.:|.:...|..:...:.|.....  ..||.:..    .|||..
Zfish     9 LHMGSKVNKLTLGFQRSSTSDDDSGCALEEYAWVPPGLRPEQVALYFSCLPEDKV----PYVNSP 69

  Fly   325 N------------PNISHEYNISNSIEANQTLYIHGNARTTFYDVNSIHRNDKEGL-KNYISIPT 376
            .            |...:|.....|:...:...:|         :.||.|. ||.| :..:.|..
Zfish    70 GEKQRIKQLLYQLPPHDNEVRYCQSLSEEEKKELH---------MFSIQRK-KEALGRGTLKILP 124

  Fly   377 EPVQELENYGRCVKCNSRVL-GESSGC----TAMDQIYHIFCFTCTDCQINLQGKPFYALDGKPY 436
            ..|    ::..|..|..|:. ||.:.|    .|..|.:|..||||:.|...|....::..|||.:
Zfish   125 RTV----HHAACEHCGERLSGGEMAVCVSRAAAAGQCWHPACFTCSTCSELLVDLIYFYHDGKVH 185

  Fly   437 CEYDYLQTLE-KCSVCMEPIL-ERILRATGKPYHPQCFTCVVCGKSLDGLLFTVDATNQNYCITD 499
            |...:.:.|: :||.|.|.|. :....|.|:.:|.:.|:|..|...|.|..: :....:.:|...
Zfish   186 CGRHHAELLKPRCSSCDEIIFADECTEAEGRHWHMKHFSCSECEVILGGQRY-IMKDGRPFCCGC 249

  Fly   500 FHKKFAPRCCVCKQPIMPDPGQ--EETIRVVALDRSFHLECYKCEDC--GLLLSSEAEGRGC--Y 558
            |...:|..|..|.|.|..|..|  .:.:...|.|     .|:.|..|  .||        ||  .
Zfish   250 FQSLYAEYCQACAQHIGVDHAQMTYDGLHWHATD-----ACFSCAQCKSSLL--------GCPFL 301

  Fly   559 PLDDHVLC-KSCN-AKRVQA 576
            |....:.| |:|: .:.|||
Zfish   302 PRQGRIYCSKACSLGEDVQA 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZyxNP_652015.1 LIM1_LPP 388..441 CDD:188737 19/57 (33%)
LIM2_LPP 448..507 CDD:188740 16/59 (27%)
LIM3_LPP 508..575 CDD:188821 19/74 (26%)
prickle1aNP_899185.2 PET_Prickle 28..124 CDD:193602 20/109 (18%)
LIM1_Prickle 132..191 CDD:188799 19/58 (33%)
LIM2_Prickle 196..251 CDD:188802 14/55 (25%)
LIM3_Prickle 256..314 CDD:188804 18/70 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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