DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zyx and Fhl3

DIOPT Version :9

Sequence 1:NP_652015.1 Gene:Zyx / 317824 FlyBaseID:FBgn0011642 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_001101449.1 Gene:Fhl3 / 313582 RGDID:1307180 Length:288 Species:Rattus norvegicus


Alignment Length:259 Identity:71/259 - (27%)
Similarity:108/259 - (41%) Gaps:24/259 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   330 HEYNISNSIEANQTLYIHGNARTTFYDVNSIHRNDKEGLKNYISIPTEPV----QEL---ENY-- 385
            ::...:|:....|.|..| ::|..||:....|.......:...|:..||.    .||   |.|  
  Rat    32 YDNTFANTCAECQQLIGH-DSRELFYEDRHFHEGCFRCCRCQRSLADEPFTCQDSELLCNECYCT 95

  Fly   386 ---GRCVKCNSRVLGESSGCTAMDQIYHIFCFTCTDCQINLQGKPFYALDGKPYCEYDYLQTL-E 446
               .:|..|...|:..|.......|.:|..||.|:.|:..|..:.|....|..||...|.... .
  Rat    96 AFSSQCSACGETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVPCYENKFAP 160

  Fly   447 KCSVCMEPILERILRATGKPYHPQCFTCVVCGKSLDGLLFTVDATNQNYCITDFHKKFAPRCCVC 511
            :|:.|.:.:.:..:....:|:|.:|..|..|...|.|..|| ...:..||:..|.:.|||:|..|
  Rat   161 RCARCSKTLTQGGVTYRDQPWHRECLVCTGCQTPLAGQQFT-SRDDDPYCVACFGELFAPKCSSC 224

  Fly   512 KQPIMPDPGQEET----IRVVAL-DRSFHLECYKCEDCGLLLSSEAEGRGCYPLDDHVLCKSCN 570
            |:||....|.|..    .:.|:. ||.:|..|:.|..|    |:...|:|..|..|.|||:.|:
  Rat   225 KRPITGGSGSEGAGLGGGKYVSFEDRHWHHSCFSCARC----STSLVGQGFVPDGDQVLCQGCS 284

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
ZyxNP_652015.1 LIM1_LPP 388..441 CDD:188737 15/52 (29%)
LIM2_LPP 448..507 CDD:188740 16/58 (28%)
LIM3_LPP 508..575 CDD:188821 23/68 (34%)