DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zyx and Sntb1

DIOPT Version :9

Sequence 1:NP_652015.1 Gene:Zyx / 317824 FlyBaseID:FBgn0011642 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_001124014.1 Gene:Sntb1 / 299940 RGDID:1307728 Length:539 Species:Rattus norvegicus


Alignment Length:332 Identity:65/332 - (19%)
Similarity:103/332 - (31%) Gaps:123/332 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ESVAQQLRELSLPKGDTGSPLVCIGHGKVAK---LVAKI-------------------------- 37
            ||::.|.|.:.:.|.:.|...:.|..||..|   |::||                          
  Rat   105 ESISNQKRGVKVLKQELGGLGISIKGGKENKMPILISKIFKGLAADQTQALYVGDAILSVNGADL 169

  Fly    38 ---SNNQNASVKRRLDIPPKPPIKYN------------------EMPQVPSSRQVLCSREPLYSQ 81
               ::::.....:|........:||.                  |.|...|.|....|.:||.||
  Rat   170 RDATHDEAVQALKRAGKEVLLEVKYMREATPYVKKGSPVSEIGWETPPPESPRLGSGSADPLSSQ 234

  Fly    82 PLIGVEKTMRGHMPFRK-YLSSEFGVADTQINRKTTLDNPAILEQQLEALAYHKLQMEKKGLLGV 145
            |......  |..:|.:. |::....:||.: ||:..:.:|.         |.|.:.:..|.....
  Rat   235 PFSFHRD--RKSIPLKMCYVTRSMTLADPE-NRQLEIHSPD---------AKHTVVLRSKDSATA 287

  Fly   146 QAKPTQPLNSFTKPLSKTLSKSLIYSNLGS--VRKEIETLELLTDETKISASTYSN----VNETA 204
            ||                 ..|.|:||:|.  ||...:..|.| .:|.|:.|....    :.|..
  Rat   288 QA-----------------WFSAIHSNVGDLLVRVVADIREQL-GKTGIAGSREIRHLGWLAEKV 334

  Fly   205 MDSSHSSTQKMLSVCTNFISDNEKDEL------------------------------PPPPSPES 239
            ...|....:..|.|.|      |||.|                              |...||::
  Rat   335 PGESEKQWKPALVVLT------EKDLLIYDSMPRRKEAWLSPVHSYPLLATRLVHSGPGKGSPQA 393

  Fly   240 AVSSSYS 246
            |:..|::
  Rat   394 AMDLSFA 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZyxNP_652015.1 LIM1_LPP 388..441 CDD:188737
LIM2_LPP 448..507 CDD:188740
LIM3_LPP 508..575 CDD:188821
Sntb1NP_001124014.1 PDZ_signaling 112..193 CDD:238492 11/80 (14%)
PH <239..296 CDD:278594 15/85 (18%)
PHsplit_syntrophin <243..300 CDD:269960 16/83 (19%)
PH 324..434 CDD:278594 14/83 (17%)
PH 324..434 CDD:214574 14/83 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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