DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zyx and Lpp

DIOPT Version :9

Sequence 1:NP_652015.1 Gene:Zyx / 317824 FlyBaseID:FBgn0011642 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_001139424.1 Gene:Lpp / 210126 MGIID:2441849 Length:613 Species:Mus musculus


Alignment Length:653 Identity:214/653 - (32%)
Similarity:303/653 - (46%) Gaps:128/653 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LPKGDTGSPLVCIGHGKVAKLVAKISNNQNASVKRRLDIPPK-------PPIKYNEMPQVPSSRQ 70
            ||...||.||     |.|...:....:..|.|:......|||       |..|||...|......
Mouse     7 LPPKSTGEPL-----GHVPARMETTHSFGNPSISVSTQQPPKKYAPVVAPKPKYNPYKQPGGEGD 66

  Fly    71 VLCSREPLYSQPLIGVEKTMRGHMPFRKYL-SSEFGVADTQINRKTTLDNPAILEQQLEALAYHK 134
            :|....|....|  |......||.|....| ...|.|.......||..:..:.|:.::::|....
Mouse    67 LLPPPPPPLEDP--GTIPPGPGHFPPPPPLDEGAFKVQQGNPGGKTLEERRSSLDAEIDSLTSIL 129

  Fly   135 LQME-----------------------------KKGLLGVQAKPTQPLNSFTKPLSKTLSKSLIY 170
            ..:|                             |:.::..|...|....|.|||.....:..:..
Mouse   130 ADLECSSPYKPRPPQGSASSIASPPVSTPVTGHKRMVIPQQPPLTATKKSATKPQPAPQAAPIPV 194

  Fly   171 SNLGSVRKEIETLEL-LTDETKISASTYSNVNETAMDSSH-----SSTQ-----------KMLSV 218
            :.:|:::.:.:.:.. .|..:..|..|::...::|..|.|     ||.|           :.:.|
Mouse   195 TPIGTLKPQPQPVPASYTTASTSSRPTFNVQVKSAQPSPHYMAGPSSGQIYGPGPRGYNNQPVPV 259

  Fly   219 CTNFISDNEKDELPPPPSPESAVSSSYSELRHATLEFNKPIDYLQNNQTTNPLQIYANQYAMQHD 283
                     ..:.||||   :.|.:.|:.:..:.........|     |:|..:.|...||....
Mouse   260 ---------SGQCPPPP---TCVGTDYAYIPPSGHPPESGYGY-----TSNQGRYYEPYYAAGPS 307

  Fly   284 ATGKSSSTYDSIY-EPINPRPCVADTLPRESYNLHNSYVNDNNPNISHEYNISNSIEANQTLYIH 347
            ..|:|..  |:.| :.:.|     :|..||:.....:..|.|:|.:   |.:|            
Mouse   308 YGGRSEG--DTAYGQQVQP-----NTWKREAAYAPPASGNQNHPGM---YPVS------------ 350

  Fly   348 GNARTTFYDVNSI-------HRNDKEGLKNYISIPT--EPVQELEN-----------------YG 386
            |..:|...|..|.       .:....|.....|||.  .|..|||:                 :|
Mouse   351 GPKKTYITDPVSAPCAPPLQPKGGYPGPMGPPSIPPSFRPEDELEHLTKKMLYDMENPPADDYFG 415

  Fly   387 RCVKCNSRVLGESSGCTAMDQIYHIFCFTCTDCQINLQGKPFYALDGKPYCEYDYLQTLEKCSVC 451
            ||.:|...|:||.:|||||||::|:.||||..|.:.|:|:||||::.|.|||..|:.|||:||||
Mouse   416 RCARCGENVVGEGTGCTAMDQVFHVDCFTCIVCDVKLRGQPFYAVEKKAYCEPCYINTLEQCSVC 480

  Fly   452 MEPILERILRATGKPYHPQCFTCVVCGKSLDGLLFTVDATNQNYCITDFHKKFAPRCCVCKQPIM 516
            .:||:|||||||||.|||.|||||:|.:||||:.|||||....:||.||||||||||.|||:|||
Mouse   481 SKPIMERILRATGKAYHPHCFTCVMCHRSLDGIPFTVDACGLIHCIEDFHKKFAPRCSVCKEPIM 545

  Fly   517 PDPGQEETIRVVALDRSFHLECYKCEDCGLLLSSEAEGRGCYPLDDHVLCKSCNAKRVQALTNRM 581
            |.||||||:|:|||||.||:.||:|||||.|| ||.:.:||||||.|:|||:||:.|::.||.:.
Mouse   546 PAPGQEETVRIVALDRDFHVHCYRCEDCGGLL-SEGDNQGCYPLDGHILCKTCNSARIRVLTAKA 609

  Fly   582 TSE 584
            :::
Mouse   610 STD 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZyxNP_652015.1 LIM1_LPP 388..441 CDD:188737 28/52 (54%)
LIM2_LPP 448..507 CDD:188740 42/58 (72%)
LIM3_LPP 508..575 CDD:188821 46/66 (70%)
LppNP_001139424.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..119 30/118 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 133..259 18/125 (14%)
PRK14971 <139..>240 CDD:237874 14/100 (14%)
dnaA 192..>388 CDD:237605 44/234 (19%)
LIM1_TRIP6 417..470 CDD:188736 28/52 (54%)
LIM 477..536 CDD:351770 42/58 (72%)
LIM 537..602 CDD:351770 45/65 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 95 1.000 Domainoid score I7393
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001663
OrthoInspector 1 1.000 - - otm42482
orthoMCL 1 0.900 - - OOG6_108119
Panther 1 1.100 - - LDO PTHR24207
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3402
SonicParanoid 1 1.000 - - X2600
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.800

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