DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zyx and zfhx3

DIOPT Version :9

Sequence 1:NP_652015.1 Gene:Zyx / 317824 FlyBaseID:FBgn0011642 Length:585 Species:Drosophila melanogaster
Sequence 2:XP_002937624.2 Gene:zfhx3 / 100495855 XenbaseID:XB-GENE-853731 Length:3619 Species:Xenopus tropicalis


Alignment Length:667 Identity:120/667 - (17%)
Similarity:201/667 - (30%) Gaps:271/667 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MESVAQQLRELSLPKGDTGSPLVCIGHGKVAKLVAKISNNQNASVKRRLDIPPKPPIKYNEMPQV 65
            :|||:|.|:.........|.||:.:           .:|:..:|..:..|.|....:    .||:
 Frog   142 VESVSQLLQSGEACDSSPGGPLLSL-----------YTNSLPSSTGKSEDSPSAGSV----YPQI 191

  Fly    66 PSSRQVLCS---------REPLYSQPLIGVEKTMRG-------HMPFRKYLSSEFGVADTQINRK 114
            .::..:..|         :..|.:..|.||...:..       |...:.||:|: |.|.:....|
 Frog   192 INTFHIASSFRKWFESSDKSFLNTSALTGVSPVLHSFRVFDVRHKSNKDYLNSD-GSAKSSCVSK 255

  Fly   115 TTLDN---------------PAILEQQLEALAY-------------HKLQM---EKKGLLG---- 144
            ...:|               ..||...|..|::             |::.:   |:|.|..    
 Frog   256 DVPNNVDLSKYDGFVLYGKRKPILMCFLCKLSFGYVRSFVTHAVHDHRMTLSEDERKILSNKNIS 320

  Fly   145 --VQ--AKPTQPLNSFTKPLSKTLSKSLI------------YSNLGSVRKEIE-----TLELLTD 188
              :|  .|..:||.||.:|.:|:.....:            |.....:|.|.|     :|.||.|
 Frog   321 AIIQGIGKDKEPLVSFLEPKNKSFQHPFVSSANPTGPGNSFYGKFSGIRVEGEEGLQASLALLQD 385

  Fly   189 ETKISASTYSNVNETAMDSSHSSTQKMLSVCTNFISDN--------EKDELPPPPSPESAVSSSY 245
            ...:|         .|:|.:.|          |.::.|        ....:..|.||....||..
 Frog   386 NEVVS---------RAVDQTQS----------NILTQNALLNLGGLPGSSINSPVSPVPLSSSGS 431

  Fly   246 SELRHATLEFNKPIDYLQNNQTTNPLQIYANQYA-------------MQHD---------ATGKS 288
            .:.:|.   .:|.|:..:..:.....|:..::..             |:.|         :||..
 Frog   432 GQTKHT---HSKVIEMTELEKENIGEQVSLSERVEIDEEREEDEEEEMEEDDEEDCKTLLSTGLE 493

  Fly   289 SSTYDSIYEPINPRPCVADTLPRESYNLHNSYVNDNN--PNISHEYNISNSIEANQTLYIHGNAR 351
            ....|   :|.:.....|.:..::..:..|..::::|  ||:|     ..|:..     |...:.
 Frog   494 DDLMD---QPQDDTGAFAGSSGQKDLSPTNQSISNSNLLPNVS-----QTSVRG-----ITSTSS 545

  Fly   352 TTFYDVNSIHR-------ND-------KEGLK--------------------------------- 369
            ::|.|.:..::       ||       ::|.|                                 
 Frog   546 SSFVDFDGANKRNHLSFNNDGFGASMAEDGRKLDFNNESANRDNATAPEPNENAEGEDGNFTTHH 610

  Fly   370 NYISIPTEPVQELENYGRCV--------KCNSRVLGESSGCTAMDQIYHI--FCFT--CTDCQIN 422
            .::.||.|     ...|.|.        ||:: |||.|........:.|.  .|.|  |..|.  
 Frog   611 QHVDIPCE-----LGLGECASGSGVECPKCDT-VLGSSRSLGGHMTMMHSRNSCKTLKCPKCN-- 667

  Fly   423 LQGKPFYALDGKPYCEYDYLQTLE------------KCSVCMEPILERILRATGKPYHPQ----- 470
                          ..|.|.||||            .|..|          .:|:| ||:     
 Frog   668 --------------WHYKYQQTLEAHMKEKHPEPGGSCVYC----------KSGQP-HPRLARGE 707

  Fly   471 ---C----FTCVVCGKS 480
               |    |.|.||..|
 Frog   708 SYTCGYKPFRCEVCNYS 724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZyxNP_652015.1 LIM1_LPP 388..441 CDD:188737 13/64 (20%)
LIM2_LPP 448..507 CDD:188740 12/45 (27%)
LIM3_LPP 508..575 CDD:188821
zfhx3XP_002937624.2 C2H2 Zn finger 663..683 CDD:275368 8/35 (23%)
C2H2 Zn finger 718..735 CDD:275368 4/7 (57%)
C2H2 Zn finger 1365..1385 CDD:275368
C2H2 Zn finger 1403..1423 CDD:275371
C2H2 Zn finger 1431..1452 CDD:275371
C2H2 Zn finger 1547..1569 CDD:275368
C2H2 Zn finger 1598..1616 CDD:275368
HOX 2122..2178 CDD:197696
Homeobox 2222..2276 CDD:365835
COG5576 2590..2717 CDD:227863
Homeobox 2624..2677 CDD:365835
Homeobox 2926..2979 CDD:365835
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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