DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zyx and fhl5

DIOPT Version :9

Sequence 1:NP_652015.1 Gene:Zyx / 317824 FlyBaseID:FBgn0011642 Length:585 Species:Drosophila melanogaster
Sequence 2:NP_001116957.1 Gene:fhl5 / 100144736 XenbaseID:XB-GENE-1002465 Length:282 Species:Xenopus tropicalis


Alignment Length:188 Identity:54/188 - (28%)
Similarity:79/188 - (42%) Gaps:9/188 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   383 ENYGRCVKCNSRVLGESSGCTAMDQIYHIFCFTCTDCQINLQGKPFYALDGKPYCEYDY-LQTLE 446
            |...:|..|.:.::..|.........:|..||.|..|:..:..|||...:.|.||...| .|...
 Frog    97 EYSSKCFGCRATIMPGSRKMEYNGSNWHETCFVCQSCREPVGNKPFIPKESKIYCMPCYEKQFAN 161

  Fly   447 KCSVCMEPILERILRATGKPYHPQCFTCVVCGKSLDGLLFTVDATNQNYCITDFHKKFAPRCCVC 511
            :|..|.:.|.:..|....:.:|.:||.|..|.|:|.|...| ......||:..|...:|.:|..|
 Frog   162 QCKSCRKAITKGGLSFQEQQWHRECFVCTSCKKNLVGEKST-SRDESPYCVDCFDNLYAKKCAAC 225

  Fly   512 KQPIMPDPGQEETIRVVALDRSFHLECYKCEDCGLLLSSEAEGRGCYPLDDHVLCKSC 569
            .:||   .||.....:...||.:|.:|:.|..|    |....|...:..:|.|||.||
 Frog   226 AKPI---TGQGGAKYISFEDRQWHSDCFTCAKC----SKSLVGEKFHTNEDDVLCPSC 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZyxNP_652015.1 LIM1_LPP 388..441 CDD:188737 14/52 (27%)
LIM2_LPP 448..507 CDD:188740 17/58 (29%)
LIM3_LPP 508..575 CDD:188821 20/62 (32%)
fhl5NP_001116957.1 LIM <6..33 CDD:351770
LIM1_FHL 37..95 CDD:188729
LIM2_FHL 102..155 CDD:188731 14/52 (27%)
LIM3_FHL 163..214 CDD:188732 15/51 (29%)
LIM4_FHL 222..277 CDD:188733 20/62 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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