DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zyx and ablim1a

DIOPT Version :9

Sequence 1:NP_652015.1 Gene:Zyx / 317824 FlyBaseID:FBgn0011642 Length:585 Species:Drosophila melanogaster
Sequence 2:XP_021336151.1 Gene:ablim1a / 100003558 ZFINID:ZDB-GENE-080219-41 Length:803 Species:Danio rerio


Alignment Length:307 Identity:77/307 - (25%)
Similarity:125/307 - (40%) Gaps:79/307 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   305 VADTL---PRESYNLHNSYVNDNNPNISHEYNISNSIEANQTLYIHGNARTTFYDVNSIHRNDKE 366
            ||:.|   |::|......::|.:      :|.::.|:    |...|..        .|.|:.:|.
Zfish    44 VAEVLYLIPKQSVKQQLPFINPD------DYYMTESL----TPVAHTQ--------ESHHQTEKP 90

  Fly   367 GLKNYISIPTEPVQELENYGRCVKCNSRVLGESSGCTAMDQIYHIFCFTCTDCQINLQGKPFYAL 431
            .:                  ||.||.....||.....|  :.:||.||||..|..:|....|:..
Zfish    91 LI------------------RCAKCGELCKGEVLRVQA--KHFHIKCFTCKVCGCDLAQGGFFMK 135

  Fly   432 DGKPYCEYDYLQTLE--KCSVCMEPILERILRATGKPYHPQCFTCVVCGKSL---DGLLFTVDAT 491
            :|:..|..|| |.:.  :|::|.|.:...::.|.||.|||.||.|.:|.:..   |.:.|.....
Zfish   136 NGEYLCTLDY-QRIHGTRCNICGEFVEGEVVTALGKTYHPTCFVCTICKRPFPAGDRVTFNGKDC 199

  Fly   492 NQNYCI---------------TDFHKKFAPRCCVCKQPIMPDPGQEETIRVVALDRSFHLECYKC 541
            ...||.               :::.||.:..|..|.:.|  ..||    .::||:|.:||.|:||
Zfish   200 LCQYCAEPMSPGPTKDVVGPSSEYEKKNSKSCAGCGRDI--KNGQ----ALLALERQWHLGCFKC 258

  Fly   542 EDCGLLLSSEAEGRG----C---YPLDDHVLCKSCNAKRVQALTNRM 581
            :.|..:|:.|...:.    |   |.|...|.|::|.    |.:|.::
Zfish   259 KACAKVLTGEYISKDGAPFCERDYQLQFGVQCEACQ----QFITGKV 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZyxNP_652015.1 LIM1_LPP 388..441 CDD:188737 17/52 (33%)
LIM2_LPP 448..507 CDD:188740 19/76 (25%)
LIM3_LPP 508..575 CDD:188821 22/73 (30%)
ablim1aXP_021336151.1 LIM1_abLIM 94..145 CDD:188713 17/52 (33%)
LIM2_abLIM 150..205 CDD:188714 16/54 (30%)
LIM3_abLIM 231..282 CDD:188715 17/56 (30%)
LIM4_abLIM 290..345 CDD:188716 4/16 (25%)
AbLIM_anchor 370..767 CDD:318423
VHP 768..803 CDD:128458
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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