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Protein Alignment CG12116 and Spr

DIOPT Version :9

Sequence 1:	NP_572481.1	Gene:	CG12116 / 31782	FlyBaseID:	FBgn0030041	Length:	273	Species:	Drosophila melanogaster
Sequence 2:	NP_062054.1	Gene:	Spr / 29270	RGDID:	3753	Length:	262	Species:	Rattus norvegicus

Alignment Length:	274	Identity:	76/274 - (27%)
Similarity:	127/274 - (46%)	Gaps:	43/274 - (15%)

- Green bases have known domain annotations that are detailed below.

  Fly    15 VLSGSSNPLGQSLALEFCRRLATGSLALILDEDQEQLRELENHLRSELKTE--NVKVTIGKLDKD 77
            ||:|:|...|::||.:....|:.||:.|:.......||:    |:.||.|:  .::|.:...|..
  Rat    12 VLTGASRGFGRALAPQLAGLLSPGSVLLLSARSDSMLRQ----LKEELCTQQPGLQVVLAAADLG 72

  Fly    78 HSNGVQLMEQALMDNFMADKDNQRFERSIILHNEGKAATHMLLEPQSDDDWKAYVQQQLYAPV-- 140
            ..:|||.:..|:.:.    ...:|.:|.::::|.|...          |..|.::.....|.|
  Rat    73 TESGVQQLLSAVREL----PRPERLQRLLLINNAGTLG----------DVSKGFLNINDLAEVNN 123

  Fly   141 --ALNQTWL---------QSKHLERVEKLAVNVTSSLMVRPLVHAGLLCSCKRARDMYFRAMAAE 194
              |||.|.:         ...:...:.|..||::|...::|....||.|:.|.||||.::.:|.|
  Rat   124 YWALNLTSMLCLTTGTLNAFSNSPGLSKTVVNISSLCALQPFKGWGLYCAGKAARDMLYQVLAVE 188

  Fly   195 EYRFGVHVLSFSPGLMDTHEGQCDVNGNRITPADLIATKQLLQL---PRIKPC-QATLKLINILE 255
            |.  .|.|||::||.:||:..|.    .|.|..|.....:|.:|   ..:..| .:..||:::|:
  Rat   189 EP--SVRVLSYAPGPLDTNMQQL----ARETSMDPELRSRLQKLNSEGELVDCGTSAQKLLSLLQ 247

  Fly   256 EISFVSGHDVDYYD 269
            ..:|.||..||:||
  Rat   248 RDTFQSGAHVDFYD 261

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.