DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32006 and foxf1

DIOPT Version :9

Sequence 1:NP_726538.1 Gene:CG32006 / 317817 FlyBaseID:FBgn0052006 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_001039226.1 Gene:foxf1 / 734087 XenbaseID:XB-GENE-478922 Length:373 Species:Xenopus tropicalis


Alignment Length:175 Identity:49/175 - (28%)
Similarity:79/175 - (45%) Gaps:35/175 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 EKPPFNYSHIIGMAMLQN--GRITLQQLCSWIEAKFAFFR-VRKKWNNSIRHNLSLHHCFRNRKR 206
            ||||::|..:|.||:..:  .|:||.::..:::::|.||| ..:.|.||:||||||:.||....:
 Frog    53 EKPPYSYIALIVMAIQSSPTKRLTLSEIYQFLQSRFPFFRGSYQGWKNSVRHNLSLNECFIKLPK 117

  Fly   207 --EERGKGGYWELGVDP-----------KKCDRKRIRNRKIFHPTQNQTAKLQYEHLTEIQQAKS 258
              ...|||.||.  :||           ::..|...|..:...|..:....|.:.|:.|....:.
 Frog   118 GLGRPGKGHYWT--IDPASEFMFEEGSFRRRPRGFRRKCQALKPMYSMMNGLGFNHIPETYSFQG 180

  Fly   259 ARKNHSRHIKKSKTSSLPETS---EANIFNVVPHKKHNIADENDG 300
            |          |.|.:.|..|   ::.|..:..|...|:    ||
 Frog   181 A----------SGTIACPPNSLSLDSGIGMMNGHLPSNV----DG 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32006NP_726538.1 FH 146..217 CDD:294049 30/75 (40%)
foxf1NP_001039226.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..51
Forkhead 53..139 CDD:365978 33/87 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 236..255
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 283..306
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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