DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32006 and Foxl3

DIOPT Version :10

Sequence 1:NP_726538.1 Gene:CG32006 / 317817 FlyBaseID:FBgn0052006 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_001419358.1 Gene:Foxl3 / 680273 RGDID:1594158 Length:231 Species:Rattus norvegicus


Alignment Length:190 Identity:51/190 - (26%)
Similarity:81/190 - (42%) Gaps:48/190 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 NYSHIIGMAMLQN--GRITLQQLCSWIEAKFAFFRVRKK-WNNSIRHNLSLHHCFRNRKREE--- 208
            :|..:|.||:.|:  ||:||..:..:|..||.::|..:: |.|||||||||:.||....|.|   
  Rat    51 SYIALIAMAIQQSPAGRVTLSGIYDFIMRKFPYYRANQRAWQNSIRHNLSLNSCFVKVPRTEGHD 115

  Fly   209 RGKGGYWELGVDPKKCDRKRIRNRKIFHPTQNQTAKLQYEHLTEIQQAKSARKNHSRHIKKSKTS 273
            :|||.||...   ..|                       |.|.::.:..:.|:...|...||:.:
  Rat   116 KGKGNYWTFA---GGC-----------------------ESLLDLFENGNFRRRRRRRGPKSEEA 154

  Fly   274 SLPETSEANIFNVVPHKKHNIADEN----DGQRQLQTINKDDILKKKSELDTIVSSTESF 329
            ..|         :.|..:.:...:.    |.:.|.:.:...||   |..:|.|:||.:.|
  Rat   155 PGP---------LQPAARGSPGPDGTQAPDREAQARLVTHRDI---KFSIDYILSSPDPF 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32006NP_726538.1 Forkhead 146..217 CDD:459732 32/72 (44%)
Foxl3NP_001419358.1 FH_FOX 51..139 CDD:469596 35/113 (31%)

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