DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32006 and foxf1

DIOPT Version :9

Sequence 1:NP_726538.1 Gene:CG32006 / 317817 FlyBaseID:FBgn0052006 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_001073655.1 Gene:foxf1 / 566407 ZFINID:ZDB-GENE-050419-153 Length:380 Species:Danio rerio


Alignment Length:369 Identity:76/369 - (20%)
Similarity:134/369 - (36%) Gaps:121/369 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 PTHKSRVHDKQIKMFYSTRENTDKISHIILEANAQKSITKRPTASERFEIFVNKIKRDLTEYEKL 135
            |.|.|.:.:|.::.             .::|.::..|.||                         
Zfish    13 PAHSSPMTEKPVQT-------------PVMETSSSSSSTK------------------------- 39

  Fly   136 ASKYETDV--TEKPPFNYSHIIGMAMLQN--GRITLQQLCSWIEAKFAFFR-VRKKWNNSIRHNL 195
            |.|....:  .||||::|..:|.||:..:  .|:||.::..:::::|.||| ..:.|.||:||||
Zfish    40 AKKTNAGIRRPEKPPYSYIALIVMAIQSSPTKRLTLSEIYQFLQSRFPFFRGSYQGWKNSVRHNL 104

  Fly   196 SLHHCFRNRKR--EERGKGGYWELGVDPKKCDRKRIRNRKIFHPTQNQTAKLQYEHLTEIQQAKS 258
            ||:.||....:  ...|||.||.  :||                    .::..:|..:..::.:.
Zfish   105 SLNECFIKLPKGLGRPGKGHYWT--IDP--------------------ASEFMFEEGSFRRRPRG 147

  Fly   259 ARKNHSRHIKKSKTSSLPETSEANIFNVVPHKKHNIADENDGQRQLQTINKDDILKKKSELDTIV 323
            .|:. .:.:|.|..|.:....    ||.:| :.:|......|                      :
Zfish   148 FRRK-CQALKPSMYSMMNGLG----FNHIP-ESYNFQGGGGG----------------------L 184

  Fly   324 SSTESFLTESQNLNCFNSHKTD---------------TTNTPISAEKNFCT------FNNFYSEM 367
            |...:.|:....:...|.|...               :||:..| ....||      :.:..|..
Zfish   185 SCPPNSLSLESGIGMMNGHLASNMEGMGLAGHSMPHLSTNSGHS-YMGSCTGSSGTEYPHHDSSA 248

  Fly   368 TPVLASNSNIVEDQNV--STDVSWPS-HPCNITINYDYTNFQPI 408
            :|:|.| ..:::...|  ||..:||| .|.::.....|...||:
Zfish   249 SPLLTS-GGVMDPHAVYSSTASAWPSAPPTSLNNGTSYIKQQPL 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32006NP_726538.1 FH 146..217 CDD:294049 30/75 (40%)
foxf1NP_001073655.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49 10/73 (14%)
FH 52..140 CDD:214627 33/109 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.810

Return to query results.
Submit another query.