DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32006 and Foxi3

DIOPT Version :10

Sequence 1:NP_726538.1 Gene:CG32006 / 317817 FlyBaseID:FBgn0052006 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_001102819.1 Gene:Foxi3 / 502846 RGDID:1561816 Length:400 Species:Rattus norvegicus


Alignment Length:223 Identity:59/223 - (26%)
Similarity:102/223 - (45%) Gaps:38/223 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 LASKYETDVTEKPPFNYSHIIGMAMLQNG---RITLQQLCSWIEAKFAFF-RVRKKWNNSIRHNL 195
            :||:.:.....:||::||.:|.|| :|:.   ::||..:..::...|.|: |.:..|.|||||||
  Rat   120 MASREDLMKMVRPPYSYSALIAMA-IQSAPERKLTLSHIYQFVADNFPFYQRSKAGWQNSIRHNL 183

  Fly   196 SLHHCFRN--RKREERGKGGYWELGVDPKKCDR-------KRIRNRKIFHPTQNQTAKLQYEHLT 251
            ||:.||:.  |..::.|||.||.|  || .|::       :|.|.|:     ...::.|.....|
  Rat   184 SLNDCFKKVPRDEDDPGKGNYWTL--DP-NCEKMFDNGNFRRKRRRR-----AEASSNLTVPSGT 240

  Fly   252 EIQQAKSARKNHSRHIKKSKTSSLPETSEANIFNVVPHKKHNIADENDGQRQLQTINKDDILKKK 316
            .....:|:|...|..::....||:...|::             .:..:|.:...:......|...
  Rat   241 SKSDGQSSRLRVSGKLEGDSPSSMLRPSQS-------------PEPPEGTKSTASSPGASTLTST 292

  Fly   317 SELDTIVSSTESFLTESQNLNCFNSHKT 344
            ..|:|.:|   ||.|.|.|.:..::.:|
  Rat   293 PCLNTFLS---SFNTLSVNASSMSTQRT 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32006NP_726538.1 Forkhead 146..217 CDD:459732 31/76 (41%)
Foxi3NP_001102819.1 FH_FOX 128..220 CDD:469596 35/95 (37%)
COG5025 <130..340 CDD:227358 57/213 (27%)

Return to query results.
Submit another query.