DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32006 and foxf2a

DIOPT Version :9

Sequence 1:NP_726538.1 Gene:CG32006 / 317817 FlyBaseID:FBgn0052006 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_001077284.1 Gene:foxf2a / 407681 ZFINID:ZDB-GENE-110407-5 Length:383 Species:Danio rerio


Alignment Length:338 Identity:81/338 - (23%)
Similarity:126/338 - (37%) Gaps:79/338 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 EKPPFNYSHIIGMAMLQN--GRITLQQLCSWIEAKFAFFR-VRKKWNNSIRHNLSLHHCFRNRKR 206
            ||||::|...|.||:..:  .|:||.::..:::|:|.||| ..:.|.||:||||||:.||....:
Zfish    57 EKPPYSYIAPIVMAIQSSPTKRLTLSEIYQFLQARFPFFRGSYQGWKNSVRHNLSLNECFIKLPK 121

  Fly   207 --EERGKGGYWELGVDP-------KKCDRKRIR--NRKIFHPTQNQTAKLQYEHLTEIQQAKSAR 260
              ...|||.||.  :||       :...|:|.|  .||.      |..|..|..:..|....|..
Zfish   122 GLGRPGKGHYWT--IDPGSEFMFEEGSFRRRPRGFRRKC------QALKPMYRMMNGIGFGASML 178

  Fly   261 KNHSRHIKKSKTSSLPETSEANIFNV-------------------VPHKKHNIADENDGQRQLQT 306
            ..:...  :|.::||  ...||.:|:                   ..|..|  ...:.|...:..
Zfish   179 PQNFDF--QSPSASL--ACHANSYNLDMMSNAVQGVHAGYDGLGAGHHVSH--MSPSTGSTYMTA 237

  Fly   307 INKDDILKKKSEL--DTIVSSTESFLTESQNLNCFNSHKTDTTN------------TPISAEKNF 357
            ..    :....|.  |:..|...|..|.|.:|.|.:.:...:.:            .|:|:... 
Zfish   238 CQ----VASNGEYGPDSSNSPLHSPPTMSGSLECHSPYGAASAHGASSGVSPYIKQQPLSSSSP- 297

  Fly   358 CTFNNFYSEMTPVLASNSNIVEDQNVSTDVS----WPSHPCNITINYDY-------TNFQPIVDS 411
             |.:..:|.|.|.....|.:..:...|.|:|    :.||...:....|:       |:|.|....
Zfish   298 -TSSGLHSSMPPYSLEQSYLHHNGRDSADISGMSRYQSHSSPVCDRKDFVLNFNGITSFHPSTSG 361

  Fly   412 IAEQFQCLHDSAG 424
            .....| ||...|
Zfish   362 SYYHHQ-LHHHQG 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32006NP_726538.1 FH 146..217 CDD:294049 31/75 (41%)
foxf2aNP_001077284.1 FH 58..146 CDD:214627 33/89 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.