DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32006 and Foxj3

DIOPT Version :10

Sequence 1:NP_726538.1 Gene:CG32006 / 317817 FlyBaseID:FBgn0052006 Length:443 Species:Drosophila melanogaster
Sequence 2:NP_001101441.1 Gene:Foxj3 / 313554 RGDID:1311770 Length:622 Species:Rattus norvegicus


Alignment Length:466 Identity:94/466 - (20%)
Similarity:165/466 - (35%) Gaps:159/466 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 QSCKEENLLSLEEEDSDEERELTNLNWLLRNQNLTWPKTIDYNPTEILNSKRNTEPTHKSRVHDK 80
            |:|.....|.:   .|:.|..||:::||   ..||....|..:..        |:..|.:.:..|
  Rat     6 QACPSVTSLRM---TSELESSLTSMDWL---PQLTMRAAIQKSDA--------TQNAHGTGISKK 56

  Fly    81 QIKMFYSTRENTDKISHIILEANAQKSITKRPTASERFEIFVNKIKRDLTEYEKLASKYETDVTE 145
                            :.:|:.|         |..::.|:..:|                   ..
  Rat    57 ----------------NALLDPN---------TTLDQEEVQQHK-------------------DG 77

  Fly   146 KPPFNYSHIIGMAMLQN--GRITLQQLCSWIEAKFAFFR-VRKKWNNSIRHNLSLHHCFRN--RK 205
            |||::|:.:|..|:..:  .::||.::..||...|.::| ....|.|||||||||:.||..  |.
  Rat    78 KPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHNLSLNKCFLKVPRS 142

  Fly   206 REERGKGGYWELGVDPKK-----CDRKRIR----------------------------------- 230
            :::.|||.||.:..:||:     ..:||.|                                   
  Rat   143 KDDPGKGSYWAIDTNPKEDTLPTRPKKRARSVERASTPYSIDSDSLGMECIISGSASPTLAINTV 207

  Fly   231 -NRKIFH---------PTQNQTAKLQYEHLTEIQ-------QAKSARKNHSRHIKKSKTS----- 273
             |:...:         |..:....|..:.|..:.       .:.:...||...:.:|.|.     
  Rat   208 TNKVTLYNTDQDGSDSPRSSLNNSLSDQSLASVNLNSVGSVHSYTPVTNHPEPVSQSLTPQQQPQ 272

  Fly   274 -SLPETSEANIFNVVPHKKHNIADENDGQRQL------QTINKDDILKKKSELDTIVSSTESFLT 331
             :|||..:..:|.     ::|..|.:...|.|      |::::..::...||     ||.:|   
  Rat   273 YNLPERDKQLLFT-----EYNFEDLSASFRSLYKSVFEQSLSQQGLMSIPSE-----SSQQS--- 324

  Fly   332 ESQNLNCFNSHKTDTTNTPISAEKNFCTFNNFYSEMTPVLASNSNIVEDQNVSTDVSWPSHPCNI 396
               :.:|...|...:|.|. ....|..:..|.:|.::   |:.||.|...::       |||...
  Rat   325 ---HTSCSYQHSPSSTVTS-HPHSNQSSLPNNHSGLS---ATGSNSVAQVSL-------SHPQMH 375

  Fly   397 TINYDYTNFQP 407
            |....:|..:|
  Rat   376 TQPSPHTPHRP 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32006NP_726538.1 Forkhead 146..217 CDD:459732 30/75 (40%)
Foxj3NP_001101441.1 COG5025 <54..345 CDD:227358 67/351 (19%)
FH_FOXJ3 77..155 CDD:410826 30/77 (39%)

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