DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32006 and Foxd4

DIOPT Version :9

Sequence 1:NP_726538.1 Gene:CG32006 / 317817 FlyBaseID:FBgn0052006 Length:443 Species:Drosophila melanogaster
Sequence 2:XP_001055972.2 Gene:Foxd4 / 252886 RGDID:621716 Length:432 Species:Rattus norvegicus


Alignment Length:173 Identity:60/173 - (34%)
Similarity:88/173 - (50%) Gaps:30/173 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 TRENTDKISHIILEANAQKSITK---RPTASERFEI-----FVNKIKRDLTEYEKLASKYETDVT 144
            |.::..:.||..||.:.|:...:   |.:|.:..::     |:.|.:...|.    |:....|..
  Rat    39 TEDDGGEESHKCLERSLQRPGARTLARRSAWDCGDLSNSSGFLRKFRAPRTR----ATTTTADGP 99

  Fly   145 E--KPPFNYSHIIGMAMLQ--NGRITLQQLCSWIEAKFAFFRVRK--KWNNSIRHNLSLHHCFRN 203
            :  |||::|..:|.||:||  :.|:||..:|::|..:|.::| ||  .|.|||||||||:.||..
  Rat   100 QPAKPPYSYIALITMAILQSPHKRLTLSGICAFISGRFPYYR-RKFPAWQNSIRHNLSLNDCFVK 163

  Fly   204 RKRE--ERGKGGYWELGVDPKKCDR----KRIRNRKIF---HP 237
            ..||  ..|||.||.|  ||...|.    ..:|.||.|   ||
  Rat   164 IPREPGHPGKGNYWSL--DPASQDMFDNGSFLRRRKRFKRHHP 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32006NP_726538.1 FH 146..217 CDD:294049 37/76 (49%)
Foxd4XP_001055972.2 Forkhead 103..189 CDD:278670 41/88 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.000

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