DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sptr and IRC24

DIOPT Version :9

Sequence 1:NP_727265.1 Gene:Sptr / 31781 FlyBaseID:FBgn0014032 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_012302.3 Gene:IRC24 / 854854 SGDID:S000001475 Length:263 Species:Saccharomyces cerevisiae


Alignment Length:273 Identity:67/273 - (24%)
Similarity:119/273 - (43%) Gaps:41/273 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLVTGASRGIGREFAQQLAKRIKAEGSMVTLLG--RNQTLLQESKAE-----IVATVPDLSVQTY 66
            :|:||||||||    .||.|.:..|.....:.|  |.:..||..:.|     .|..|.|::    
Yeast     5 ILITGASRGIG----LQLVKTVIEEDDECIVYGVARTEAGLQSLQREYGADKFVYRVLDIT---- 61

  Fly    67 SLELETAKTEDFTKILEASGGKNNFERAIVIHNAGTVGDTSKRAKEIGDTDFLQ--RYYHSNVFS 129
                :.::.|...:.:....||.:.    ::.|||.:......::...:.|..|  |.:..|.||
Yeast    62 ----DRSRMEALVEEIRQKHGKLDG----IVANAGMLEPVKSISQSNSEHDIKQWERLFDVNFFS 118

  Fly   130 AISLNCEFMRVFKGIPKL--VVNLSTLAAIAPISSMAHYCTVKAAREMYFRVLATEESAEDTLVL 192
            .:||....:.:.|..|.:  :|.:|:.|::.|.:..:.|...|||...:...:|:||.::....:
Yeast   119 IVSLVALCLPLLKSSPFVGNIVFVSSGASVKPYNGWSAYGCSKAALNHFAMDIASEEPSDKVRAV 183

  Fly   193 NYAPGVIDTQMTVQVQR----EAHDPAVVAMFREQRESKTMLTPAQTTERFIKVLEAFKFK---- 249
            ..||||:||||...::.    :...|..:..|.:..::.::|.|....    .||.....|    
Yeast   184 CIAPGVVDTQMQKDIRETLGPQGMTPKALERFTQLYKTSSLLDPKVPA----AVLAQLVLKGIPD 244

  Fly   250 --SGDHVDYRDEQ 260
              :|.::.|.||:
Yeast   245 SLNGQYLRYNDER 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SptrNP_727265.1 sepiapter_red 7..258 CDD:273660 65/269 (24%)
adh_short 10..204 CDD:278532 55/204 (27%)
IRC24NP_012302.3 SPR-like_SDR_c 4..255 CDD:187625 65/269 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2055
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

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