DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sptr and NRE1

DIOPT Version :10

Sequence 1:NP_727265.1 Gene:Sptr / 31781 FlyBaseID:FBgn0014032 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_012301.3 Gene:NRE1 / 854853 SGDID:S000001474 Length:254 Species:Saccharomyces cerevisiae


Alignment Length:267 Identity:70/267 - (26%)
Similarity:117/267 - (43%) Gaps:42/267 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLVTGASRGIGREFAQQLAKRIKAEGSMVTLLGRNQTLLQESKAE----IVATVPDLSVQTYSLE 69
            :||||.|||||:.....|....|  .::|..:.|::..|::.|.:    ....|.|::..:...:
Yeast     5 ILVTGVSRGIGKSIVDVLFSLDK--DTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQ 67

  Fly    70 LETAKTEDFTKILEASGGKNNFERAIVIHNAGTVGDTSKRAKEIGDTDFLQRYYHSNVFSAISLN 134
            |..|..:...||            ..::.|||.: :..:...|| |.:..::.|..|.||.:|| 
Yeast    68 LVNAAVKGHGKI------------DSLVANAGVL-EPVQNVNEI-DVNAWKKLYDINFFSIVSL- 117

  Fly   135 CEFMRVFKGIPKL------VVNLSTLAAIAPISSMAHYCTVKAAREMYFRVLATEESAEDTLVLN 193
                 |...:|:|      ||.:|:.|.....||...|.:.|||...:...||.||.....:.: 
Yeast   118 -----VGIALPELKKTNGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANEERQVKAIAV- 176

  Fly   194 YAPGVIDTQMTVQVQREAHDPAVVA-----MFREQRESKTMLTPAQTTERFIKV-LEAF-KFKSG 251
             |||::||.|.|.: ||...|:.::     |||..:|:..:|..:.....:.|: |... ...:|
Yeast   177 -APGIVDTDMQVNI-RENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHGIPDGVNG 239

  Fly   252 DHVDYRD 258
            .::.|.|
Yeast   240 QYLSYND 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SptrNP_727265.1 sepiapter_red 7..258 CDD:273660 69/265 (26%)
NRE1NP_012301.3 SPR-like_SDR_c 4..246 CDD:187625 69/265 (26%)

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