DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sptr and SPR

DIOPT Version :9

Sequence 1:NP_727265.1 Gene:Sptr / 31781 FlyBaseID:FBgn0014032 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_003115.1 Gene:SPR / 6697 HGNCID:11257 Length:261 Species:Homo sapiens


Alignment Length:258 Identity:87/258 - (33%)
Similarity:137/258 - (53%) Gaps:7/258 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RTYLLVTGASRGIGREFAQQLAKRIKAEGSMVTLLGRNQTLLQESKAEIVATVPDLSVQTYSLEL 70
            |...|:||||||.||..|..||. :.:.||::.|..||...|::.:||:.|....|.|.....:|
Human     7 RAVCLLTGASRGFGRTLAPLLAS-LLSPGSVLVLSARNDEALRQLEAELGAERSGLRVVRVPADL 70

  Fly    71 -ETAKTEDFTKILEASGGKNNFERAIVIHNAGTVGDTSKRAKEIGDTDFLQRYYHSNVFSAISLN 134
             ..|..:.....|.........:|.::|:|||::||.||...::.|:..:..|:..|:.|.:.|.
Human    71 GAEAGLQQLLGALRELPRPKGLQRLLLINNAGSLGDVSKGFVDLSDSTQVNNYWALNLTSMLCLT 135

  Fly   135 CEFMRVF---KGIPKLVVNLSTLAAIAPISSMAHYCTVKAAREMYFRVLATEESAEDTLVLNYAP 196
            ...::.|   .|:.:.|||:|:|.|:.|....|.||..||||:|.|:|||.||  .:..||||||
Human   136 SSVLKAFPDSPGLNRTVVNISSLCALQPFKGWALYCAGKAARDMLFQVLALEE--PNVRVLNYAP 198

  Fly   197 GVIDTQMTVQVQREAHDPAVVAMFREQRESKTMLTPAQTTERFIKVLEAFKFKSGDHVDYRDE 259
            |.:||.|....:..:.||.:....:|.:....::....:.::.:.:||..:||||.|||:.|:
Human   199 GPLDTDMQQLARETSVDPDMRKGLQELKAKGKLVDCKVSAQKLLSLLEKDEFKSGAHVDFYDK 261

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
SptrNP_727265.1 sepiapter_red 7..258 CDD:273660 85/254 (33%)
adh_short 10..204 CDD:278532 72/197 (37%)
SPRNP_003115.1 sepiapter_red 8..260 CDD:273660 85/254 (33%)
adh_short 9..212 CDD:278532 73/205 (36%)