DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sptr and F02C12.2

DIOPT Version :9

Sequence 1:NP_727265.1 Gene:Sptr / 31781 FlyBaseID:FBgn0014032 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_510229.1 Gene:F02C12.2 / 184076 WormBaseID:WBGene00008516 Length:278 Species:Caenorhabditis elegans


Alignment Length:254 Identity:67/254 - (26%)
Similarity:109/254 - (42%) Gaps:36/254 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LVTGASRGIGREFAQQLAKRIKAEGSMVTLLGRNQTLLQESKAEIV---------ATVP-DLSVQ 64
            ::||:|.|||||.|...||    ||:.||:.||::..|:|:|..::         ..|| |::..
 Worm    11 IITGSSSGIGRETALLFAK----EGAKVTVTGRSEEKLEETKKALLDAGIKESNFLIVPADITFS 71

  Fly    65 TYSLELETAKTEDFTKILEASGGKNNFERAIVIHNAG-TVGDTSKRAKEIGDTDFLQRYYHSNVF 128
            |...||.:...:.|.:|            .|:::||| ::.|..||.......:..::....||.
 Worm    72 TGQDELISQTLKKFGRI------------NILVNNAGASIPDAKKRTGIDQGIETYEQVMKLNVQ 124

  Fly   129 SAISLNCEFMRVFKGIPKL---VVNLSTLAAI-APISSMAHYCTVKAAREMYFRVLATEESAEDT 189
            |.|.:.   .:|...:.|.   :||:|::.|: |..:...:|...|||.:.|.|..|....:|..
 Worm   125 SVIEMT---QKVRPHLAKSRGEIVNVSSVVALKAGWTRTPYYPLAKAALDQYTRSAAIALISEGI 186

  Fly   190 LVLNYAPGVIDTQMTVQVQREAHDPAVVAMFREQRESKTMLTPAQTTERFIKVLEAFKF 248
            .|....||::.|.........:.|.|  ..|.:...|.|...|.....|...:.:|..|
 Worm   187 RVNTVNPGIVQTGFQANASGSSSDDA--QKFYDDMGSNTTAIPCGFAGRPEHIAKAIAF 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SptrNP_727265.1 sepiapter_red 7..258 CDD:273660 67/254 (26%)
adh_short 10..204 CDD:278532 58/208 (28%)
F02C12.2NP_510229.1 FabG 4..263 CDD:223959 67/254 (26%)
NADB_Rossmann 5..267 CDD:304358 67/254 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.92062 Normalized mean entropy S3233
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.860

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