DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sptr and dhs-13

DIOPT Version :9

Sequence 1:NP_727265.1 Gene:Sptr / 31781 FlyBaseID:FBgn0014032 Length:261 Species:Drosophila melanogaster
Sequence 2:NP_503501.1 Gene:dhs-13 / 178658 WormBaseID:WBGene00000976 Length:257 Species:Caenorhabditis elegans


Alignment Length:262 Identity:64/262 - (24%)
Similarity:112/262 - (42%) Gaps:50/262 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LVTGASRGIGREFAQQLAKRIKAEGSMVTLLGRNQTLLQESKAEIVATVPDLSVQTYSLELETAK 74
            |||.:::|||  ||  :||::.|.|:.|.:..|.    :|:..|.||.:...::..:........
 Worm    15 LVTASTKGIG--FA--IAKQLGAAGASVVVCSRK----KENVDEAVAALRLENIDAHGTTAHVGN 71

  Fly    75 TEDFTKILEASGGKNNFERA-IVIHNAGT---VGDTSKRAKEIGDTDFLQRYYHSNVFSAISLNC 135
            ..|.||:::.:  .:.|.:. |::.||..   .||..|    :.|:.: .:....||.||..|..
 Worm    72 KSDRTKLIDFT--LDRFTKLDILVSNAAVNPHYGDLMK----VTDSQW-DKLLDLNVKSAFELTK 129

  Fly   136 EFMRVFKGIPKL-------VVNLSTLAAIAPISSMAHYCTVKAAREMYFRVLATEESAEDTLVLN 193
            |      .:|.|       ||.:|::|..:|::.:..|..:|.......:.||...:..:..|.:
 Worm   130 E------AVPHLEASGRGNVVFVSSVAGYSPMNEIGAYSVMKTTLTGLSKSLALNLARRNIRVNS 188

  Fly   194 YAPGVIDTQMTVQVQREAHDPAVVAMFREQRESKTMLTPAQTTERFI----KVLEAFKFKSGDHV 254
            .|||:|.|..: ||           :|.::.|.:..|  :|..:|..    :..||..|...|..
 Worm   189 IAPGIIQTDFS-QV-----------LFSDESEKQKWL--SQIAQRRFGDPDECAEAVAFLVSDEA 239

  Fly   255 DY 256
            .|
 Worm   240 SY 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SptrNP_727265.1 sepiapter_red 7..258 CDD:273660 64/262 (24%)
adh_short 10..204 CDD:278532 52/204 (25%)
dhs-13NP_503501.1 NADB_Rossmann 9..257 CDD:304358 64/262 (24%)
fabG 9..253 CDD:235975 64/262 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2055
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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