DRSC/TRiP Functional Genomics Resources

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Protein Alignment org-1 and tbx21

DIOPT Version :9

Sequence 1:NP_001285019.1 Gene:org-1 / 31778 FlyBaseID:FBgn0021767 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_001164070.1 Gene:tbx21 / 797797 ZFINID:ZDB-GENE-080104-3 Length:609 Species:Danio rerio


Alignment Length:619 Identity:171/619 - (27%)
Similarity:246/619 - (39%) Gaps:161/619 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 GKDRSSYKPLEQIDAKLADIETH-------STGSTGTANSNSSTSSISNPSCPDQSSSSSSSSVS 118
            |.|..|:       ||.|::.:|       |....|.    ..|......|.|     :...|::
Zfish    15 GTDAQSF-------AKDAELSSHLHRHRDLSDFKMGI----QDTRFYYQDSIP-----NGQESLT 63

  Fly   119 LPTDYAGVHSEASMAPTA----------------GGTAVTTTSAGGVSASTASKKFKGQHKKDNN 167
            ||  :...|.:::.|.|.                .||..|...||..:.|:|:.|.......|..
Zfish    64 LP--FHAEHHQSAGAQTGRFYAPAPLGSCHFTSRSGTGHTYVPAGADAYSSANGKDVYPSSADGY 126

  Fly   168 SA--ENGTVKPNSHNISKGESEPVHPSL---AQAIVVLETKALWDQFHAQGTEMIITKTGRRMFP 227
            :|  ::|..:...:::         |.|   .:..|:|....||.:||...|||||||.||||||
Zfish   127 TASFQHGFPRAPMYSL---------PGLQVSGKTQVLLNNYPLWAKFHKYQTEMIITKQGRRMFP 182

  Fly   228 TFQVRIGGLDPHATYICMMDFVPMDDKRYRYAFHNSCWVVAGKADPISP-PRIHVHPDSPAVGSN 291
            .....|..|||.|.|...:|.|..|...:||  ....||..|||:...| .|:::|||||..|::
Zfish   183 FLSFNITSLDPSAHYNIYVDVVLADQHHWRY--QGGKWVQCGKAEGNMPGNRMYMHPDSPNTGTH 245

  Fly   292 WMKQIVSFDKLKLTNNQLDENG---HIILNSMHRYQPRFHLVYLPPKNASLDENEHSSHFRTFIF 353
            ||:|.|||.|||||||:...|.   .|:|.|:|:||||.|:|.:  |....::...:|..:||:|
Zfish   246 WMRQEVSFGKLKLTNNKGSSNNVAQMIVLQSLHKYQPRLHIVEV--KEDGTEDPFLTSKTQTFVF 308

  Fly   354 PETSFTAVTAYQNQRVTQLKISSNPFAKGFRDDGTNDVTTGGGSSMSSMSHESQARMKQQ--QQQ 416
            |||.|.|||||||..:|||||..|||||||||:............::....|||..:...  ..|
Zfish   309 PETQFIAVTAYQNADITQLKIDHNPFAKGFRDNYDTLYAPPDPDRLTPSPTESQQLLSGSCYPHQ 373

  Fly   417 QQQQQQQLQQQQQQQQQLKERTAATSNFGLSCSELAIEQQQQQQQQQGVLQLPATPSSSSTSGNS 481
            .....|.:....|.:...:|..:.|.    .|                    |..|:||.     
Zfish   374 PYLSDQYMSPLPQSRFYSREPVSMTQ----PC--------------------PKDPTSSP----- 409

  Fly   482 PDLLGYQMEQQLQQQHQQQQQQQHQSQQQHLHQQHQANQQQSL----LQQSQNHTQY-------- 534
                                           |.:...:.||::    |..|...|:|        
Zfish   410 -------------------------------HSRWYLSSQQAVPPNRLDFSAYETEYTSNSLYKP 443

  Fly   535 ----GSYHH--AYQAQVQSHPLTPHSSSSASPPATAAPGA-----------SAATAAVAGGAGAA 582
                .|.||  :|.::   :|.|..:.|||:|.|..|.|.           |..|::::......
Zfish   444 FPLQSSPHHPLSYYSE---NPFTSGAVSSANPGAWTASGRPSPQYLNHPHHSKPTSSLSWFRAVP 505

  Fly   583 GAGGATSATQVMSAANIYSSI----GQPYAQEQS 612
            ....::|.|...|..:...|:    .||..|::|
Zfish   506 SPAASSSPTATNSRFHASPSLLEPQRQPLLQDKS 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
org-1NP_001285019.1 TBOX 195..389 CDD:238106 97/197 (49%)
tbx21NP_001164070.1 TBOX 150..343 CDD:238106 97/196 (49%)
T-box_assoc 363..608 CDD:292794 40/240 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.910

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