DRSC/TRiP Functional Genomics Resources

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Protein Alignment org-1 and tbx20

DIOPT Version :9

Sequence 1:NP_001285019.1 Gene:org-1 / 31778 FlyBaseID:FBgn0021767 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_001030292.1 Gene:tbx20 / 619590 XenbaseID:XB-GENE-487334 Length:440 Species:Xenopus tropicalis


Alignment Length:575 Identity:191/575 - (33%)
Similarity:248/575 - (43%) Gaps:204/575 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 SPMKQIE--------ACIQTAG--KDR----SSYKPLEQIDAKLADIETHSTGSTGTANSNSSTS 98
            ||..|:.        |.:.::|  ||:    |:.|||||...|                     |
 Frog     6 SPKPQLSSRANAFSIAALMSSGTPKDKETQESTIKPLEQFVEK---------------------S 49

  Fly    99 SISNP----SCPDQSSSSSSSSVSLPTDYAGVHSEASMAPTAGGTAVTTTSAGGVSASTASKKFK 159
            |.|.|    |..|.....::|..||.|:        .:.||.                       
 Frog    50 SCSQPLGDISIVDSHGEFTNSPSSLCTE--------PLIPTT----------------------- 83

  Fly   160 GQHKKDNNSAENGTVKPNSHNISKGESEPVHPS--LAQAIVVLETKALWDQFHAQGTEMIITKTG 222
                                        ||.||  :|:....||||.|||:||..||||||||:|
 Frog    84 ----------------------------PVIPSEEMAKISCSLETKELWDKFHDLGTEMIITKSG 120

  Fly   223 RRMFPTFQVRIGGLDPHATYICMMDFVPMDDKRYRYAFHNSCWVVAGKADPISPPRIHVHPDSPA 287
            ||||||.:|...|:|..|.||.:||.||:|:||||||:|.|.|:|||||||..|.|::||||||.
 Frog   121 RRMFPTIRVSFSGVDADAKYIVLMDIVPVDNKRYRYAYHRSSWLVAGKADPPLPARLYVHPDSPF 185

  Fly   288 VGSNWMKQIVSFDKLKLTNNQLDENGHIILNSMHRYQPRFHLVYLPPKNASLDENEHSSHFRTFI 352
            .|...:||:|||:|:|||||:||::|||||||||:||||.|::......||| .|..|..|||||
 Frog   186 TGEQLLKQMVSFEKVKLTNNELDQHGHIILNSMHKYQPRVHIIKKKDHTASL-LNLKSEEFRTFI 249

  Fly   353 FPETSFTAVTAYQNQRVTQLKISSNPFAKGFRDDGTNDVTTGGGSSMSSMSHESQARMKQQQQQQ 417
            |.||.||||||||||.:|:|||.||||||||||          .|.::.:..||...:.|:....
 Frog   250 FQETVFTAVTAYQNQLITKLKIDSNPFAKGFRD----------SSRLTDIERESVESLIQKHSYA 304

  Fly   418 Q-------------QQQQQLQQQ-----QQQQQQLKERTAATSNF------------GLSCSELA 452
            :             :..|.:|.:     ..:...|....::||.|            |.|.:.||
 Frog   305 RSPIRTYGDEDVLGEDGQTMQSRGSAFTTSENLSLSSWVSSTSGFSGFQHPQSLTALGTSTASLA 369

  Fly   453 IEQQQQQQQQQGVLQ------LPATPS--SSSTSGNSPDLLGYQMEQQLQQQHQQQQQQQHQSQQ 509
               .......||.|.      :|.|||  :||..|:.|....:.|.:                  
 Frog   370 ---TPIPHPIQGTLPPYSRLGMPITPSALASSMQGSGPTFPSFHMPR------------------ 413

  Fly   510 QHLHQQHQANQQQSLLQQSQNHTQYGSYHHAYQ----AQVQSHPLTPHSSSSASP 560
                                       |||.:|    |.:|.   ..|||:..:|
 Frog   414 ---------------------------YHHYFQQGPYAAIQG---LRHSSAVMTP 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
org-1NP_001285019.1 TBOX 195..389 CDD:238106 124/193 (64%)
tbx20NP_001030292.1 T-box 96..282 CDD:366363 122/186 (66%)
T-box 98..282 122/184 (66%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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