DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment org-1 and tbx5

DIOPT Version :9

Sequence 1:NP_001285019.1 Gene:org-1 / 31778 FlyBaseID:FBgn0021767 Length:699 Species:Drosophila melanogaster
Sequence 2:XP_031756844.1 Gene:tbx5 / 619589 XenbaseID:XB-GENE-486855 Length:522 Species:Xenopus tropicalis


Alignment Length:563 Identity:167/563 - (29%)
Similarity:243/563 - (43%) Gaps:152/563 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 KKFKGQHKKDNNSAENGTVKPNSHNISKGESEPVHPSLAQAIVVLETKALWDQFHAQGTEMIITK 220
            |:.:.:.|:||....:... |.|...:  .::.|...:....|.|..:.||.:||..||||||||
 Frog    20 KELQCEPKQDNQMGASSKT-PTSPQAA--FTQQVREGMEGIKVFLHERELWLKFHEVGTEMIITK 81

  Fly   221 TGRRMFPTFQVRIGGLDPHATYICMMDFVPMDDKRYRYAFHNSCWVVAGKADPISPPRIHVHPDS 285
            .||||||:::|::.||:|...||.:||.||.||.||::|  ::.|.|.|||:|..|.|::|||||
 Frog    82 AGRRMFPSYKVKVTGLNPKTKYILLMDIVPADDHRYKFA--DNKWSVTGKAEPAMPGRLYVHPDS 144

  Fly   286 PAVGSNWMKQIVSFDKLKLTNNQLDENGHIILNSMHRYQPRFHLVYLPPKNASLDEN----EHSS 346
            ||.|::||:|:|||.|||||||.||..|||||||||:||||.|:|       ..|||    ..::
 Frog   145 PATGAHWMRQLVSFQKLKLTNNHLDPFGHIILNSMHKYQPRLHIV-------KADENNGFGSKNT 202

  Fly   347 HFRTFIFPETSFTAVTAYQNQRVTQLKISSNPFAKGFRDDGTNDVTTGGGSSMSSMSHESQARMK 411
            .|.|.:|.||:|.|||:|||.::|||||.:||||||||  |::|:.....|.|.|..:....|..
 Frog   203 AFCTHVFSETAFIAVTSYQNHKITQLKIENNPFAKGFR--GSDDMELHRMSRMQSKEYPVVPRST 265

  Fly   412 QQQQQQQQQQQQLQQQQ--------QQQQQLKERTAATSNFGLSCSEL----------------- 451
            .:|:.........|:.:        ..|.|.:...::||...|..|..                 
 Frog   266 VRQKVSSNHSPFSQETRNITGSSTLNSQYQCENGVSSTSQDLLPTSNAYPSLPHESGPIYHCTKR 330

  Fly   452 -AIEQQQQQQQQQGVLQLPAT------------PSSSSTSGNSPDLLGYQMEQQLQQQHQQQQQQ 503
             |.|:..:...::..:....:            |||||:|..|           .:.:..|:|..
 Frog   331 KASEEPAEHSYKKPYMDTSPSEEDPYYRSGYPQPSSSSSSTTS-----------FRTESAQRQAC 384

  Fly   504 QHQSQ-----------------------------------QQHLHQQHQANQ--QQSLLQQSQNH 531
            .:.|.                                   .:.|..||.:..  ..||:.:..||
 Frog   385 MYASSAPATEPVPSLEDISCNSWSSVPSYSSCTVGGGMQPMERLPYQHFSAHFTSSSLMPRLSNH 449

  Fly   532 --TQYGSYHHAYQAQVQSHPLTPHSSSSASPPATAAPGASAATAAVAGGAGAAGAGGATSATQVM 594
              ||....|..:|          |.||..:                                 ::
 Frog   450 AGTQPSDSHSMFQ----------HQSSHQA---------------------------------IV 471

  Fly   595 SAANIYSSIGQPYAQEQSNFGAIYHHNAAAAAAAHYHHGHAHG 637
            ...|..|.:.|..|.:.:.|  :|.|:.....:.|.:|. .||
 Frog   472 RQCNPQSGLQQSSALQPTEF--LYPHSVPRTISPHQYHS-VHG 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
org-1NP_001285019.1 TBOX 195..389 CDD:238106 110/197 (56%)
tbx5XP_031756844.1 T-box_TBX4_5-like 57..241 CDD:410315 109/194 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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