DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment org-1 and tbx2

DIOPT Version :9

Sequence 1:NP_001285019.1 Gene:org-1 / 31778 FlyBaseID:FBgn0021767 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_001030291.1 Gene:tbx2 / 619588 XenbaseID:XB-GENE-1018115 Length:685 Species:Xenopus tropicalis


Alignment Length:576 Identity:188/576 - (32%)
Similarity:267/576 - (46%) Gaps:130/576 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 SMAPTAGGTAVTTTSAGGVSASTASKKFKGQHKKDNNSAENGTVKPNSHNISKGESEPVHPSLAQ 195
            ::.|.|.|..::..|..|.:.:.......|.|.:..:.....:::|.    .:.|.:|.      
 Frog    42 TLPPAALGKPLSDPSLAGAAEAGLHVSALGHHHQAAHLRSLKSLEPE----EEVEDDPK------ 96

  Fly   196 AIVVLETKALWDQFHAQGTEMIITKTGRRMFPTFQVRIGGLDPHATYICMMDFVPMDDKRYRYAF 260
              |.||.|.||||||..||||:|||:||||||.|:||:.|||..|.||.:||.|..||.||:  |
 Frog    97 --VTLEAKELWDQFHKLGTEMVITKSGRRMFPPFKVRVSGLDKKAKYILLMDIVAADDCRYK--F 157

  Fly   261 HNSCWVVAGKADPISPPRIHVHPDSPAVGSNWMKQIVSFDKLKLTNNQLDENGHIILNSMHRYQP 325
            |||.|:|||||||..|.|:::||||||.|..||.:.|:|.|||||||..|::|..||||||:|||
 Frog   158 HNSRWMVAGKADPEMPKRMYIHPDSPATGEQWMAKPVAFHKLKLTNNISDKHGFTILNSMHKYQP 222

  Fly   326 RFHLV------YLPPKNASLDENEHSSHFRTFIFPETSFTAVTAYQNQRVTQLKISSNPFAKGFR 384
            |||:|      .||           .|.|||::||||.|.|||||||.::|||||.:||||||||
 Frog   223 RFHIVRANDILKLP-----------YSTFRTYVFPETDFIAVTAYQNDKITQLKIDNNPFAKGFR 276

  Fly   385 DDGTNDVTTGGGSSMSSMSHESQARMKQQQQQQQQQQQQLQQQQQQQQQLK-ERTAATSNFGLSC 448
            |       ||.|                  ::::::|..|...:..::|.| :|..|.|: ..||
 Frog   277 D-------TGNG------------------RREKRKQLSLPSLRMYEEQCKADRDGAESD-ASSC 315

  Fly   449 -----------------SELAIEQQQQQQQ------QQGVLQLPATPSSSSTSG-----NSPDLL 485
                             |.|.:.:..::::      |:...:...|..|.|..|     :||.|.
 Frog   316 DPAPGRDSLHSPLSTEPSPLRLHRSNREEKFGADSDQELDRREVRTARSHSPVGHRSPPSSPRLE 380

  Fly   486 GYQMEQQLQQQHQQQQQQQHQSQQQHLHQQHQANQQQSLLQQ-SQNHTQYGSYHHAYQA--QVQS 547
            ....::...::..:..:.:.........:..:.::.:|..:: |::..:.||......|  .||:
 Frog   381 DRGKDKNTPEKKSESPESRKDGGDNVFSRSLEKDKGESRRKEDSKSDPECGSLSKETFAPLMVQT 445

  Fly   548 HPLTPHSSSS--------------------ASPPA-------TAAPGASAATA-----AVAGGAG 580
            .. .||.|:|                    |:.|.       |..|||.:|..     |...||.
 Frog   446 DS-PPHLSASHLQSLALSGLHGQQFFNPLNAAQPLFIHPGQFTMGPGAFSAMGMGHLLASMTGAS 509

  Fly   581 AAGAGGATSATQVMSAANIYSSIGQPYAQEQS----NFGAI----YHHNAAAAAAA 628
            |...|..:|......||.....:.|.....|.    .||.:    |.:.|||||||
 Frog   510 ALDNGSLSSVQGATGAATFPFHLSQHMLASQGIPMPAFGGLFPYPYTYMAAAAAAA 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
org-1NP_001285019.1 TBOX 195..389 CDD:238106 118/199 (59%)
tbx2NP_001030291.1 T-box 97..277 CDD:366363 116/192 (60%)
T-box 99..277 115/190 (61%)
TBX 295..370 CDD:372213 13/75 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 606..660
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2837
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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