DRSC/TRiP Functional Genomics Resources

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Protein Alignment org-1 and tbr1b

DIOPT Version :9

Sequence 1:NP_001285019.1 Gene:org-1 / 31778 FlyBaseID:FBgn0021767 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_001108562.1 Gene:tbr1b / 58042 ZFINID:ZDB-GENE-000323-1 Length:676 Species:Danio rerio


Alignment Length:651 Identity:179/651 - (27%)
Similarity:256/651 - (39%) Gaps:145/651 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 QIEACIQTA-GKDR------SSYKPLEQIDAKLADIETHSTGSTGTANS--NSSTSSISNPSCPD 107
            |:|.||..| .:.:      |.|...:..:..|.|....|.|.....:|  ..:::.::|.|..|
Zfish     2 QLERCISPALARSKKCMIVGSGYPNAQASELALQDYPIISIGDNLERSSPLKKNSAGMTNQSEAD 66

  Fly   108 QSSSSSSSS-----VSLPTDYAGV----H------------SEASMAPTAGGTAVTTTSAGG--- 148
            ..:.|..||     ..|..|..||    |            |::|....:..|.....|..|   
Zfish    67 NFADSKDSSGDVQRGKLSPDLDGVADSRHTFDGSAGERYLLSQSSQVQPSPTTMFPYPSQHGPTH 131

  Fly   149 VSASTAS-KKFKGQHKKDNNSAENGTVKPNSHNISKGESEPVHP-----------------SLAQ 195
            .:.|.|| .::...|....|.|.|..:   |::..:|.:...:|                 |.||
Zfish   132 PAFSIASPSRYMAHHPVITNGAYNSLL---SNSSPQGYATAGYPYAQQYGHAYQGTAFYQFSSAQ 193

  Fly   196 AIVV-------LETKALWDQFHAQGTEMIITKTGRRMFPTFQVRIGGLDPHATYICMMDFVPMDD 253
            |.:|       |..:|||.:||...|||||||.||||||.....|.||||.|.|...:|.:..|.
Zfish   194 AGLVPGKAQVYLCNRALWLKFHRHQTEMIITKQGRRMFPFLSFNISGLDPTAHYNIFVDVILADP 258

  Fly   254 KRYRYAFHNSCWVVAGKADP-ISPPRIHVHPDSPAVGSNWMKQIVSFDKLKLTNNQLDENG---H 314
            ..:|  |....||..||||. ::..|:::|||||..|::||:|.:||.|||||||:...|.   .
Zfish   259 NHWR--FQGGKWVPCGKADTNVTGNRVYMHPDSPNTGAHWMRQEISFGKLKLTNNKGATNNTGQM 321

  Fly   315 IILNSMHRYQPRFHLVYLPPKNASLDENEHSSHFRTFIFPETSFTAVTAYQNQRVTQLKISSNPF 379
            ::|.|:|:||||.|:|.:  .....::.......:||.||||.|.|||||||..:|||||..|||
Zfish   322 VVLQSLHKYQPRLHVVQV--NEDGTEDTSQPGRVQTFTFPETQFIAVTAYQNTDITQLKIDHNPF 384

  Fly   380 AKGFRDDGTNDVTTGGGSSMSSMSHESQARMKQQQQQQQQQQQQLQQQQQQQQQLKERTAATSNF 444
            ||||||: .:.|.||......:.|.....|                    .|.....|.|.|.:|
Zfish   385 AKGFRDN-YDTVYTGCDIDRLTPSPGDSPR--------------------SQIMPSARYAMTGSF 428

  Fly   445 GLSCSELAIEQQQQQQQQQGVLQLPATPSSSSTSGN--SPDLLGYQMEQQLQQQHQQQQQQQHQS 507
               ..:..:....:.:...||...|.|..|...|.:  ||                         
Zfish   429 ---LQDQFVSSYAKSRFHPGVGGAPGTDRSVPLSNSLLSP------------------------- 465

  Fly   508 QQQHLHQQHQANQQQSLLQQSQNHTQY--GSYHHAYQAQVQSHPLTPHSSSSASPPATAAPGASA 570
              |...:...|:.|:..:..:.|...:  .:|..|..|....:..|..|.::|...|...|||..
Zfish   466 --QQTEETTVASPQRWFVTPANNRLDFAASAYDAAAAADFAGNAATLLSYAAAGVKALPLPGAGC 528

  Fly   571 ATAAVAGGAGAAGAGGATSATQVMSAANIYS-----SI----------------GQPYAQEQSNF 614
            :...:.......|.|..|.......::::.|     |:                |.|.|.|:|..
Zfish   529 SNRPLGYYGEPPGWGTRTPPQYCSKSSSVLSCWPSNSVGSRTTASSYLVPGLEDGDPIAPERSPL 593

  Fly   615 G 615
            |
Zfish   594 G 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
org-1NP_001285019.1 TBOX 195..389 CDD:238106 96/204 (47%)
tbr1bNP_001108562.1 TBOX 200..393 CDD:238106 93/197 (47%)
T-box_assoc 415..673 CDD:292794 38/210 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.910

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