DRSC/TRiP Functional Genomics Resources

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Protein Alignment org-1 and tbx18

DIOPT Version :9

Sequence 1:NP_001285019.1 Gene:org-1 / 31778 FlyBaseID:FBgn0021767 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_705951.1 Gene:tbx18 / 572713 ZFINID:ZDB-GENE-020529-2 Length:554 Species:Danio rerio


Alignment Length:627 Identity:188/627 - (29%)
Similarity:248/627 - (39%) Gaps:188/627 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 IEACIQTAGK----DRSSYKPLEQID--AKLADIETHSTGSTGTANSNSSTSSISNPSCPDQSSS 111
            :||.|.|..|    :..|....|:|:  .::.:....|||.|                ||    |
Zfish    20 VEALIGTEKKRKLEEEDSENCFEEINEVPRMTESPQPSTGRT----------------CP----S 64

  Fly   112 SSSSSVSLPTDYAGVHSEA---SMAPTAGGTAVTTTSAGGVSASTASKKFKGQHKKDNNSAENGT 173
            :.|..:...:|.:....:.   |..|.:.|..|...||                           
Zfish    65 TRSCEIDCTSDESPEPEDVLLDSPQPASQGAQVLVQSA--------------------------- 102

  Fly   174 VKPNSHNISKGESEPVHPSLAQAIVVLETKALWDQFHAQGTEMIITKTGRRMFPTFQVRIGGLDP 238
                   .|.||         :..|.|:...||.:||..||||||||.||||||..:|:|.||||
Zfish   103 -------TSSGE---------EMRVDLQGSDLWKRFHEIGTEMIITKAGRRMFPAMRVKIAGLDP 151

  Fly   239 HATYICMMDFVPMDDKRYRYAFHNSCWVVAGKADPISPPRIHVHPDSPAVGSNWMKQIVSFDKLK 303
            |..|...||.||:|:|||||.:|:|.|:|||.||...|||:::||||||.|..||:|::||||||
Zfish   152 HQQYYIAMDIVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSPASGETWMRQVISFDKLK 216

  Fly   304 LTNNQLDENGHIILNSMHRYQPRFHLV------YLPPKNASLDENEHSSHFRTFIFPETSFTAVT 362
            ||||:||:.|||||:|||:||||.|::      .|.|..|.    ......:.|.|.||.||.||
Zfish   217 LTNNELDDQGHIILHSMHKYQPRVHVIRKECGEELSPVKAV----PTGDGVKAFSFTETVFTTVT 277

  Fly   363 AYQNQRVTQLKISSNPFAKGFRDDGTN---------------------------DVTTGGGSSMS 400
            |||||::|:|||..|||||||||.|.|                           .:|..|.:.  
Zfish   278 AYQNQQITRLKIDRNPFAKGFRDSGRNRMGLEALVESYAFWRPSLRTLTFEDILGITKQGAAG-- 340

  Fly   401 SMSH---ESQARMKQQQQQQQQQQQQLQQQQQQQQQLKERTAATSNFGLS------CSELAIEQQ 456
              ||   .|.|.:                       |...:..:..|.|.      |......:.
Zfish   341 --SHGVVGSSAHL-----------------------LSSSSCPSPTFHLGSGAGPVCDYSTCSRT 380

  Fly   457 QQQQQQQGV---------LQLPATPSSSSTSGNSPDLLGYQMEQ----------QLQQQHQQQQQ 502
            .....:.|.         |..| |..:.|||.:|..:.|.:.|.          |:........|
Zfish   381 SHPLHRYGPSLSADSYSRLTSP-TADAFSTSRSSTYVSGTESEAFSCTQTGLPIQIHSMPSTTSQ 444

  Fly   503 QQHQSQQQHLHQQHQANQQQSLLQQSQN----HTQYGSYHHAYQAQVQSHPLTPHSSSSASPPAT 563
            .|: ....|.|.....||.   .|.|.|    |..||.|.:.:               |.||...
Zfish   445 LQY-LMPGHAHNAFSTNQS---TQGSYNGFRLHNPYGLYGYNF---------------STSPRLA 490

  Fly   564 AAPGASAATAAVAGGAGAAGAGGATSATQVMSAANIYSSIGQ 605
            .:|..:|||.....|:..:|..........|...::.||..|
Zfish   491 TSPEKAAATQTSFLGSSPSGTLTDRQVLSTMDGLHMLSSSQQ 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
org-1NP_001285019.1 TBOX 195..389 CDD:238106 114/199 (57%)
tbx18NP_705951.1 TBOX 109..304 CDD:238106 114/198 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593600
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2837
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.970

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