DRSC/TRiP Functional Genomics Resources

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Protein Alignment org-1 and Mga

DIOPT Version :9

Sequence 1:NP_001285019.1 Gene:org-1 / 31778 FlyBaseID:FBgn0021767 Length:699 Species:Drosophila melanogaster
Sequence 2:XP_006234859.1 Gene:Mga / 499874 RGDID:1561597 Length:3093 Species:Rattus norvegicus


Alignment Length:392 Identity:134/392 - (34%)
Similarity:193/392 - (49%) Gaps:73/392 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 GGVSASTASKKFKGQHKKDNNSAENGTVKPN-------SHNISKGESE-----PVHPSLAQAIVV 199
            ||.....|...|....:..|...:.|.:..|       |...|.|:|:     |...::.:..|.
  Rat    14 GGTVTGAAPTFFVILKQPGNGKTDQGILVTNRDARALLSRESSPGKSKEKICLPADCTVGKITVT 78

  Fly   200 LETKALWDQFHAQGTEMIITKTGRRMFPTFQVRIGGLDPHATYICMMDFVPMDDKRYRYAFHNSC 264
            |:..::|::||.:.||||:||.||||||..:..|.|||.:..||.:||..|:|..||::  :...
  Rat    79 LDNNSMWNEFHNRSTEMILTKQGRRMFPYCRYWITGLDSNLKYILVMDISPVDSHRYKW--NGRW 141

  Fly   265 WVVAGKADPISPPRIHVHPDSPAVGSNWMKQIVSFDKLKLTNNQLDENGHIILNSMHRYQPRFHL 329
            |..:|||:|....|:.:||:||:.|..||.|.|||.|||||||.||:.|||||:|||||.||.||
  Rat   142 WEPSGKAEPHILGRVFIHPESPSTGHYWMHQPVSFYKLKLTNNTLDQEGHIILHSMHRYLPRLHL 206

  Fly   330 VYLPPKNAS--LDENEHSSHFRTFIFPETSFTAVTAYQNQRVTQLKISSNPFAKGFRDDGTNDVT 392
            |  |.:.|:  :..|....|  ||.||:|.|.|||||||.::|||||..|||||||||||     
  Rat   207 V--PAEKATEVIQLNGPGVH--TFTFPQTEFFAVTAYQNIQITQLKIDYNPFAKGFRDDG----- 262

  Fly   393 TGGGSSMSSMSHESQARMKQQQQQQQQQQQQLQQQQQQQQQLKERTAA---TSNF-----GLSCS 449
                     :|.:.| |..:|:....|:...:......:.:|.|...:   :.:|     |...|
  Rat   263 ---------LSSKPQ-RDGKQRNSSDQEGNSVSSSPGHRVRLTEGEGSEIHSGDFDPVLRGHETS 317

  Fly   450 ELAIEQQQQQQQQQGVLQLPATPSSSSTSGNSPDLLGY----------QMEQQLQQQHQQQQQQQ 504
            .|.:|:.....:|                    |.||:          |:::::.:.|....::.
  Rat   318 SLGLEKAPNNVKQ--------------------DFLGFMNTDSTHEVPQLKREISESHVSSFEEN 362

  Fly   505 HQ 506
            .|
  Rat   363 SQ 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
org-1NP_001285019.1 TBOX 195..389 CDD:238106 103/195 (53%)
MgaXP_006234859.1 T-box_MGA-like 75..260 CDD:410321 99/190 (52%)
DUF4801 1040..1081 CDD:406462
Herpes_BLLF1 <1519..1828 CDD:282904
Atrophin-1 1692..>2024 CDD:397323
bHLHzip_MGA 2454..2518 CDD:381481
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1201455at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

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