DRSC/TRiP Functional Genomics Resources

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Protein Alignment org-1 and tbxt

DIOPT Version :9

Sequence 1:NP_001285019.1 Gene:org-1 / 31778 FlyBaseID:FBgn0021767 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_001008139.1 Gene:tbxt / 493501 XenbaseID:XB-GENE-478789 Length:434 Species:Xenopus tropicalis


Alignment Length:505 Identity:145/505 - (28%)
Similarity:226/505 - (44%) Gaps:95/505 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 VSASTASKKFKGQHKKDN--NSAENGTVKPNSHNISKGESEPVHPSLAQAIVVLETKALWDQFHA 211
            |||:.:..| ..|::.|:  ::.||        .:..| ||...|:..:..|.||.:.||.:|..
 Frog     3 VSATESCAK-NVQYRVDHLLSAVEN--------ELQAG-SEKGDPTEKELKVSLEERDLWMRFKE 57

  Fly   212 QGTEMIITKTGRRMFPTFQVRIGGLDPHATYICMMDFVPMDDKRYRYAFHNSCWVVAGKADPISP 276
            ...|||:||.||||||..:|.:.||||:|.|..::|||..|:.|::|.  |..||..||.:|.:|
 Frog    58 LTNEMIVTKNGRRMFPVLKVSVSGLDPNAMYTFLLDFVAADNHRWKYV--NGEWVPGGKPEPQAP 120

  Fly   277 PRIHVHPDSPAVGSNWMKQIVSFDKLKLTNNQLDENGHIILNSMHRYQPRFHLVYLPPKNASLDE 341
            ..:::|||||..|::|||..|||.|:||| |:::..|.|:|||:|:|:||.|:|.:......:  
 Frog   121 SCVYIHPDSPNFGAHWMKDPVSFSKVKLT-NKMNGGGQIMLNSLHKYEPRIHIVRVGGTQRMI-- 182

  Fly   342 NEHSSHFRTFIFPETSFTAVTAYQNQRVTQLKISSNPFAKGFRDDGTNDVTTGGGSSMSSMSHES 406
            ..||       ||||.|.|||||||:.:|.|||..|||||.|.|                     
 Frog   183 TSHS-------FPETQFIAVTAYQNEEITALKIKHNPFAKAFLD--------------------- 219

  Fly   407 QARMKQQQQQQQQQQQQLQQQQQQQQQLKERTAATSNFGLSCSELAIEQQQQQQQQQGVLQLPAT 471
               .|::...:....:.:..|.....||  .|....|.|..||                 ..|.|
 Frog   220 ---AKERNDYKDILDEGIDSQHSNFSQL--GTWLIPNGGSLCS-----------------PNPHT 262

  Fly   472 PSSSSTSGNSPDLLGYQMEQQLQQQHQQQQQQQHQS---QQQHLHQQHQ----ANQQQSLLQQSQ 529
            ...:..|.:||.  |.:....|         :.|:|   ...::|:.:.    |:...:.|...|
 Frog   263 QFGAPISLSSPH--GCERYSSL---------RNHRSAPYPSPYVHRNNSPNNLADNSSACLSMLQ 316

  Fly   530 NHTQYGSYHHAYQAQVQSHP-LTPHSSSSASPPATAA-PGA-SAATAAVAGGAGAAGAGGATSAT 591
            :|..:.:      .|:.:|. :.|.|.|:.:||.::. |.. |.:.:.:...:.:.|.....|:.
 Frog   317 SHDNWST------LQMPAHTGMLPMSHSAGTPPTSSQYPSLWSVSNSTLTPVSQSGGITNGISSQ 375

  Fly   592 QVMSAANIYSSIGQPYAQEQSNFGAIYHHNAAAAAAAHYHHGHAHGHAHS 641
            .:..:...|||:........:. ..:|.|.:....|.:.:...||....|
 Frog   376 YLRGSTPHYSSLSHAVPSPATG-SPLYEHGSQTEIAENQYDVTAHSRLSS 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
org-1NP_001285019.1 TBOX 195..389 CDD:238106 90/193 (47%)
tbxtNP_001008139.1 T-box 44..219 CDD:307177 89/186 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1201455at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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