DRSC/TRiP Functional Genomics Resources

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Protein Alignment org-1 and ocm

DIOPT Version :9

Sequence 1:NP_001285019.1 Gene:org-1 / 31778 FlyBaseID:FBgn0021767 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_001188998.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster


Alignment Length:543 Identity:108/543 - (19%)
Similarity:176/543 - (32%) Gaps:193/543 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTHLMG-----PTECAGAMMTTTSMQFLDTSLTDYNCYGNDYWT------SPY--MTGGLSPMKQ 52
            :.|:.|     ||.....:: |..:..|.:.|.......|:..|      :||  :.|.:||...
  Fly  1407 LRHMQGNACTKPTPMTHPLL-TKKINVLCSLLVKQRVRENEKKTLGDGSGAPYEVLAGDVSPQTS 1470

  Fly    53 IEACIQTAGKDRS-SYKPLEQIDAKLADIETHSTGSTGTANSNSSTSSISNPSCPDQSSSSSSSS 116
            :      ..|:|| ..|...|.|.:|.                        ||.|..:.||..| 
  Fly  1471 L------LMKNRSRDLKRKSQADERLL------------------------PSGPSMTKSSKPS- 1504

  Fly   117 VSLPTDYAGVHSEASMAPTAGGTAVTTTSA----GGVSASTASKKFKGQHKKDNNSA----ENGT 173
                   ||.:      |.|...|.:||||    .|.|....:.|......|:.:||    .|..
  Fly  1505 -------AGGY------PIAASVATSTTSAFASSSGKSTPVCTAKTNSASTKNKSSATGIRSNIE 1556

  Fly   174 VKPNSHNISKGESEPVHPSLAQA---IVVLETKALWDQFH----AQGTEMI-ITKTGRRMFPTFQ 230
            .:..:||   ...|...|.|.|.   .|||:   ::|.|.    ...::|| :|    |:....|
  Fly  1557 FRKVNHN---DVDELQIPELHQTDHRWVVLD---IFDDFSHIFVPSFSDMISLT----RIHSVMQ 1611

  Fly   231 V-----RIGGLD--PHATYICMMDFVPMDDKRYRYAFHNSCWVVAGKADPIS---PPRIHVHPDS 285
            |     ::..|.  |:|.|..   ||....|:..|            ..|:|   ||.:.|    
  Fly  1612 VAEERQKVVKLQFFPNAPYDA---FVTPSSKKKIY------------FGPLSLDMPPPVLV---- 1657

  Fly   286 PAVGSNWMKQIVSFDKLKLTNNQLDENGHIILNSMHRYQPRFHLVYLPPKNASLDENEHSSHFRT 350
                     .:.|.|: |:...::.:..|.|....||....|.::.:   |..:       ||..
  Fly  1658 ---------LLQSVDR-KMMLREVYQREHSIPVQRHRRSMAFWVLQI---NGQV-------HFEI 1702

  Fly   351 FIFPETSFTAVTAYQNQRVTQLKISSNPFAKGFRDDGTNDVTTGGGSSMSSMSHESQARMKQQQ- 414
                :|..||..|.|.:                     |.:.|..|.::..:..:....:::.| 
  Fly  1703 ----DTESTAKLAAQQK---------------------NAIGTPPGLNVLKIPSQLSVEIEKNQD 1742

  Fly   415 -----------QQQQQQQQQLQQQQQQQQQLK-------ERTAATSNFGLSCSELAIEQQQQQQQ 461
                       ::....::||...:|..:|.:       |||..|.               |...
  Fly  1743 EVPPVVVIDSDEEDDDGERQLVIDEQDDEQAETDVKQEVERTGFTI---------------QTLP 1792

  Fly   462 QQGVLQLPATPSSSSTSGNSPDL 484
            ..|.||:..:.|:.::|..:.|:
  Fly  1793 SSGALQITISDSAETSSHPAKDV 1815

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
org-1NP_001285019.1 TBOX 195..389 CDD:238106 41/211 (19%)
ocmNP_001188998.1 DUF4801 771..821 CDD:292677
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439067
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11267
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.930

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