DRSC/TRiP Functional Genomics Resources

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Protein Alignment org-1 and Tbx3

DIOPT Version :9

Sequence 1:NP_001285019.1 Gene:org-1 / 31778 FlyBaseID:FBgn0021767 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_853669.1 Gene:Tbx3 / 353305 RGDID:735203 Length:743 Species:Rattus norvegicus


Alignment Length:680 Identity:207/680 - (30%)
Similarity:285/680 - (41%) Gaps:160/680 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 TSSISNPSCPDQSSSSSSSSVSLPTDYAGVHSEASMAPTAGGTAVTTTSAGGVSASTASKKFKGQ 161
            ||...:|..|.::...:.|:|   ..:......|...|..|..|:   |..|..|.....:..| 
  Rat    13 TSMAYHPFLPHRAPDFAMSAV---LGHQPPFFPALTLPPNGAAAL---SLPGALAKPIMDQLVG- 70

  Fly   162 HKKDNNSAENG----TVKPNSHNISKGESEPVHPSLAQAIVVLETKALWDQFHAQGTEMIITKTG 222
                  :||.|    ::.|.:|.......||.........|.||.|.||||||.:||||:|||:|
  Rat    71 ------AAETGIPFSSLGPQAHLRPLKTMEPEEDVEDDPKVHLEAKELWDQFHKRGTEMVITKSG 129

  Fly   223 RRMFPTFQVRIGGLDPHATYICMMDFVPMDDKRYRYAFHNSCWVVAGKADPISPPRIHVHPDSPA 287
            |||||.|:||..|||..|.||.:||.:..||.||:  ||||.|:|||||||..|.|:::||||||
  Rat   130 RRMFPPFKVRCSGLDKKAKYILLMDIIAADDCRYK--FHNSRWMVAGKADPEMPKRMYIHPDSPA 192

  Fly   288 VGSNWMKQIVSFDKLKLTNNQLDENG--------------------HIILNSMHRYQPRFHLV-- 330
            .|..||.::|:|.|||||||..|::|                    ..||||||:||||||:|  
  Rat   193 TGEQWMSKVVTFHKLKLTNNISDKHGFTLAFPSDHATWQGNYSFGTQTILNSMHKYQPRFHIVRA 257

  Fly   331 ----YLPPKNASLDENEHSSHFRTFIFPETSFTAVTAYQNQRVTQLKISSNPFAKGFRDDGTNDV 391
                .||           .|.|||::||||.|.|||||||.::|||||.:|||||||||.|    
  Rat   258 NDILKLP-----------YSTFRTYLFPETEFIAVTAYQNDKITQLKIDNNPFAKGFRDTG---- 307

  Fly   392 TTGGGSSMSSMSHESQARMKQQQQQQQQQQQQLQQQQ------QQQQQLKERTAATSNFGLSC-S 449
             .|.......::.:|.....::.:::.....:...:|      .|.......|..|||....| |
  Rat   308 -NGRREKRKQLTLQSMRVFDERHKKETGTSDESSSEQAAFNCFAQASSPAVSTVGTSNLKDLCPS 371

  Fly   450 ELAIEQQQQQQQQQGV--------------------------LQL-PATPS----------SSST 477
            |...:.:.:.:::.|.                          .|| ||.||          :|..
  Rat   372 EAESDAEAESKEEHGPEACDTAKISTTTAEEPGRDKGSPATRAQLFPAEPSRARDTARLDKASPD 436

  Fly   478 SGNSPDLLGYQMEQQLQQQHQQQQQQQHQS---QQQHLHQQHQANQQQSLLQQSQNHTQYGSYHH 539
            |.:||..:..........:|:...::...|   .:........|....|:...:..|...|....
  Rat   437 SRHSPATISSSTRVPGADEHRSPGREGPVSAKVDEARALPAKDAFAPLSVQTDATAHLTQGPLPG 501

  Fly   540 -------AYQAQVQSHPLTPH----------SSSSA--SPPATAAPGASAA-----TAAVAGGAG 580
                   |.|.....|||..|          ||.:|  .|......|||..     :.|:|..|.
  Rat   502 LGFAPGLAGQQFFNGHPLFLHPGQFAMGGAFSSMAAGMGPLLATVSGASTGVSGLDSTAMASAAA 566

  Fly   581 AAGAGGATSAT-------QVMSAANIYSSIGQPYAQEQSNFGAI----YHHNAAAAAAAHYHHGH 634
            |.|..||::||       .|:::..:          ..|.||::    |.:.||||||       
  Rat   567 AQGLSGASAATLPFHLQQHVLASQGL----------AMSPFGSLFPYPYTYMAAAAAA------- 614

  Fly   635 AHGHAHSHAHAHAHGPYASAYDKLKVSRHA 664
            :...|.|..|.|......|...:|:.|.::
  Rat   615 SSAAASSSVHRHPFLNLNSMRPRLRYSPYS 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
org-1NP_001285019.1 TBOX 195..389 CDD:238106 118/219 (54%)
Tbx3NP_853669.1 T-box_TBX2_3-like 101..305 CDD:410314 115/216 (53%)
TBX 323..404 CDD:403708 10/80 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 371..467 14/95 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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