DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment org-1 and Tbx20

DIOPT Version :9

Sequence 1:NP_001285019.1 Gene:org-1 / 31778 FlyBaseID:FBgn0021767 Length:699 Species:Drosophila melanogaster
Sequence 2:XP_006242782.1 Gene:Tbx20 / 315497 RGDID:1309396 Length:446 Species:Rattus norvegicus


Alignment Length:591 Identity:189/591 - (31%)
Similarity:255/591 - (43%) Gaps:197/591 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 MQFLDTSLTDYNCYGNDYWTSPYMTGGLSPMKQIEACIQTAGKDRSSYKPLEQIDAK-------- 76
            |:|..:.....:...|.:..:..|:.| .| |:.||.       .::.|||||...|        
  Rat     1 MEFTASPKPQLSSRANAFSIAALMSSG-GP-KEKEAA-------ENTIKPLEQFVEKSSCAQPLG 56

  Fly    77 -LADIETHSTGSTGTANSNSSTSSISNPSCPDQSSSSSSSSVSLPTDYAGVHSEASMAPTAGGTA 140
             |..::.|:....|..:|.||:|..:.|..|                                  
  Rat    57 ELTSLDAHAEFGGGGGSSPSSSSLCTEPLIP---------------------------------- 87

  Fly   141 VTTTSAGGVSASTASKKFKGQHKKDNNSAENGTVKPNSHNISKGESEPVHPS--LAQAIVVLETK 203
              ||                                           |:.||  :|:....||||
  Rat    88 --TT-------------------------------------------PIIPSEEMAKIACSLETK 107

  Fly   204 ALWDQFHAQGTEMIITKTGRRMFPTFQVRIGGLDPHATYICMMDFVPMDDKRYRYAFHNSCWVVA 268
            .|||:||..||||||||:|||||||.:|...|:||.|.||.:||.||:|:||||||:|.|.|:||
  Rat   108 ELWDKFHELGTEMIITKSGRRMFPTIRVSFSGVDPEAKYIVLMDIVPVDNKRYRYAYHRSSWLVA 172

  Fly   269 GKADPISPPRIHVHPDSPAVGSNWMKQIVSFDKLKLTNNQLDENGHIILNSMHRYQPRFHLVYLP 333
            |||||..|.|::||||||..|...:||:|||:|:|||||:||::|||||||||:||||.|::...
  Rat   173 GKADPPLPARLYVHPDSPFTGEQLLKQMVSFEKVKLTNNELDQHGHIILNSMHKYQPRVHIIKKK 237

  Fly   334 PKNASLDENEHSSHFRTFIFPETSFTAVTAYQNQRVTQLKISSNPFAKGFRDDGTNDVTTGGGSS 398
            ...||| .|..|..|||||||||.||||||||||.:|:|||.||||||||||          .|.
  Rat   238 DHTASL-LNLKSEEFRTFIFPETVFTAVTAYQNQLITKLKIDSNPFAKGFRD----------SSR 291

  Fly   399 MSSMSHESQARMKQQQQQQQQ------QQQQLQQQQQ------------QQQQLKERTAATSNF- 444
            ::.:..||...:.|:....:.      ::..|.::.|            ....|....:::|:| 
  Rat   292 LTDIERESVESLIQKHSYARSPIRTYGEEDVLGEESQTTPNRGSAFTTSDNLSLSSWVSSSSSFP 356

  Fly   445 -----------GLSCSELAI---EQQQQQQQQQGVLQLPATPS--SSSTSGNSPDLLGYQMEQQL 493
                       |.|.:.:|.   ...|........|.:|.|||  :||..|:.|....:.|.:  
  Rat   357 GFQHPQPLTALGTSTASIATPIPHPIQGSLPPYSRLGMPLTPSAIASSMQGSGPTFPSFHMPR-- 419

  Fly   494 QQQHQQQQQQQHQSQQQHLHQQHQANQQQSLLQQSQNHTQYGSYHHAYQ----AQVQSHPLTPHS 554
                                                       |||.:|    |.:|.   ..||
  Rat   420 -------------------------------------------YHHYFQQGPYAAIQG---LRHS 438

  Fly   555 SSSASP 560
            |:..:|
  Rat   439 SAVMTP 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
org-1NP_001285019.1 TBOX 195..389 CDD:238106 126/193 (65%)
Tbx20XP_006242782.1 TBOX 99..291 CDD:238106 126/202 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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