DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment org-1 and Tbx5

DIOPT Version :9

Sequence 1:NP_001285019.1 Gene:org-1 / 31778 FlyBaseID:FBgn0021767 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_001009964.1 Gene:Tbx5 / 304514 RGDID:1305702 Length:517 Species:Rattus norvegicus


Alignment Length:520 Identity:170/520 - (32%)
Similarity:235/520 - (45%) Gaps:113/520 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 SKGESEPVHPSLAQAI----VVLETKALWDQFHAQGTEMIITKTGRRMFPTFQVRIGGLDPHATY 242
            ||..|.|......|.:    |.|..:.||.:||..||||||||.||:|||:::|::.||:|...|
  Rat    36 SKSPSSPQAAFTQQGMEGIKVFLHERELWLKFHEVGTEMIITKAGRQMFPSYKVKVTGLNPKTKY 100

  Fly   243 ICMMDFVPMDDKRYRYAFHNSCWVVAGKADPISPPRIHVHPDSPAVGSNWMKQIVSFDKLKLTNN 307
            |.:||.||.||.||::|  ::.|.|.|||:|..|.|::|||||||.|::||:|:|||.|||||||
  Rat   101 ILLMDIVPADDHRYKFA--DNKWSVTGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNN 163

  Fly   308 QLDENGHIILNSMHRYQPRFHLVYLPPKNASLDEN----EHSSHFRTFIFPETSFTAVTAYQNQR 368
            .||..|||||||||:||||.|:|       ..|||    ..::.|.|.:||||:|.|||:|||.:
  Rat   164 HLDPFGHIILNSMHKYQPRLHIV-------KADENNGFGSKNTAFCTHVFPETAFIAVTSYQNHK 221

  Fly   369 VTQLKISSNPFAKGFRDDGTNDVTTGGGSSMSSMSHESQARMKQQQQQQQQQQQQLQQQQQQQQQ 433
            :|||||.:||||||||  |::|:.....|.|.|..:....|            ..::.:......
  Rat   222 ITQLKIENNPFAKGFR--GSDDLELHRMSRMRSKEYPVVPR------------STVRHKVANHSP 272

  Fly   434 LKERTAA---TSNFGLSCSELAIEQQQQQQQQQGVLQLPATPSSSSTSGNSPDLLGYQMEQQLQQ 495
            ....|.|   :||.|           .|.|.:.||            ||.|.|||.......|.|
  Rat   273 FSSETRALSTSSNLG-----------SQYQCENGV------------SGPSQDLLPPPNPYPLAQ 314

  Fly   496 QHQQQQQQQHQSQQQHLHQQHQANQQQSLLQQSQNHTQYGSYHHAYQA-----QVQSHPLTPHSS 555
            :|.|......:..::....:|...:.......|:..|.|.|.:...|.     :.:|........
  Rat   315 EHSQIYHCTKRKDEECSSTEHPYKKPYMETSPSEEDTFYRSGYPQQQGLSTSYRTESAQRQACMY 379

  Fly   556 SSASPPA--------------TAAPGASAAT----------------AAVAGG------AGAAGA 584
            :|::||:              .:.|..|:.|                |....|      ||.|..
  Rat   380 ASSAPPSEPVPSLEDISCNTWPSMPSYSSCTVTTVQPMDRLPYQHFSAHFTSGPLVPRLAGMANH 444

  Fly   585 GG----------ATSATQ--VMSAANIYSSIGQPYAQEQSNFGAIYHHNAAAAAAAHYHHGHAHG 637
            |.          .||.|.  |:......:.:..|.:.:...|  :|.|......:.|.:|. .||
  Rat   445 GSPQLGEGMFQHQTSVTHQPVVRQCGPQTGLQSPGSLQPPEF--LYTHGVPRTLSPHQYHS-VHG 506

  Fly   638  637
              Rat   507  506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
org-1NP_001285019.1 TBOX 195..389 CDD:238106 111/201 (55%)
Tbx5NP_001009964.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..46 4/9 (44%)
TBOX 53..241 CDD:238106 110/198 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 270..313 15/65 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 331..369 6/37 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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