DRSC/TRiP Functional Genomics Resources

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Protein Alignment org-1 and Tbx21

DIOPT Version :9

Sequence 1:NP_001285019.1 Gene:org-1 / 31778 FlyBaseID:FBgn0021767 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_001100513.1 Gene:Tbx21 / 303496 RGDID:1308264 Length:528 Species:Rattus norvegicus


Alignment Length:481 Identity:137/481 - (28%)
Similarity:191/481 - (39%) Gaps:136/481 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 ISNPSCPDQSSSSS---------------------SSSVSLPTDYAGVHSEASMAPTAGGTAVTT 143
            |..|.|.|..:.:.                     .|....|||...|   :|:..:..|:|:..
  Rat     3 IVEPGCGDMLTGTEPIPSDEGRGTGADQQHRFFYPESGAQDPTDRRAV---SSLGSSYSGSALVP 64

  Fly   144 TSAGGVSASTASKKFKGQHKKDNNSAENGTVKPNSHNISKGESEPVHPSLAQAI----------- 197
            ...|         :|.|.:.....:...|...|       |||.| .|:.|:..           
  Rat    65 APPG---------RFLGAYAYPPRAQATGFPGP-------GESFP-PPAGAEGYPPVDGYAAPDP 112

  Fly   198 -------------------------VVLETKALWDQFHAQGTEMIITKTGRRMFPTFQVRIGGLD 237
                                     |.|....||.:|:...|||||||.||||||.....:.||:
  Rat   113 RAGLYPGPREDYALPAGLEVSGKLRVALSNHLLWSKFNQHQTEMIITKQGRRMFPFLSFTVAGLE 177

  Fly   238 PHATYICMMDFVPMDDKRYRYAFHNSCWVVAGKADPISP-PRIHVHPDSPAVGSNWMKQIVSFDK 301
            |.:.|...:|.|.:|...:||  .:..||..|||:...| .|::||||||..|::||:|.|||.|
  Rat   178 PTSHYRMFVDVVLVDQHHWRY--QSGKWVQCGKAEGSMPGNRLYVHPDSPNTGAHWMRQEVSFGK 240

  Fly   302 LKLTNNQLDENG---HIILNSMHRYQPRFHLVYLPPKNASLDENEHSSHFRTFIFPETSFTAVTA 363
            ||||||:...|.   .|:|.|:|:||||.|:|.:   |....|...|::...|.|.||.|.||||
  Rat   241 LKLTNNKGASNNVTQMIVLQSLHKYQPRLHIVEV---NDGEPEAACSANTHIFTFQETQFIAVTA 302

  Fly   364 YQNQRVTQLKISSNPFAKGFRDD----------------GTNDVTTGGG--SSMSSMSHESQAR- 409
            |||..:|||||.:||||||||::                |.|....||.  |.:.|..:...:| 
  Rat   303 YQNAEITQLKIDNNPFAKGFRENFESMYTSVDTSVPSPPGPNCQLLGGDPYSPLLSNQYPVSSRF 367

  Fly   410 ---MKQQQQQQQQQQQQLQQQQQQQQQLKERTAATS-NFGLSCSELAIEQQQQQQQQQGVLQLPA 470
               :..|.:....|...|...::...:.:.|..:.. .|                       ||:
  Rat   368 YPDLPGQPKDMVSQSYWLGTPREPSYETEFRAVSVKPTF-----------------------LPS 409

  Fly   471 TPSSSSTSGNSPDLL----GYQMEQQ 492
            .|.::......||:|    |:.|..|
  Rat   410 APGTTVPYYRGPDVLAPGAGWPMAPQ 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
org-1NP_001285019.1 TBOX 195..389 CDD:238106 94/249 (38%)
Tbx21NP_001100513.1 T-box 138..324 CDD:279278 92/190 (48%)
T-box_assoc <392..518 CDD:292794 11/67 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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