DRSC/TRiP Functional Genomics Resources

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Protein Alignment org-1 and Tbx4

DIOPT Version :9

Sequence 1:NP_001285019.1 Gene:org-1 / 31778 FlyBaseID:FBgn0021767 Length:699 Species:Drosophila melanogaster
Sequence 2:XP_006247098.1 Gene:Tbx4 / 303399 RGDID:1309057 Length:555 Species:Rattus norvegicus


Alignment Length:591 Identity:178/591 - (30%)
Similarity:253/591 - (42%) Gaps:152/591 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 PDQSSSSSSSSVSLPTDYAGVHSEASMA-PTAGGTAVTTTSAGGVSASTASKKFKGQHKKDNNSA 169
            |....:|:|::.::|        |.::| |...|||:::....|...:.|:            :|
  Rat    19 PALGETSNSNNTNVP--------EPALATPGLSGTALSSPPGQGADVAAAA------------AA 63

  Fly   170 ENGTVKPNSHNISKGESEPVHPSLAQAIVVLETKALWDQFHAQGTEMIITKTGRRMFPTFQVRIG 234
            .....:....||..|               |..|.||.:||..||||||||.||||||:::|::.
  Rat    64 AAAAAEQTIENIKVG---------------LHEKELWKKFHEAGTEMIITKAGRRMFPSYKVKVT 113

  Fly   235 GLDPHATYICMMDFVPMDDKRYRYAFHNSCWVVAGKADPISPPRIHVHPDSPAVGSNWMKQIVSF 299
            |::|...||.::|.||.||  :||.|.::.|:|||||:|..|.|::|||||||.|::||:|:|||
  Rat   114 GMNPKTKYILLIDIVPADD--HRYKFCDNKWMVAGKAEPAMPGRLYVHPDSPATGAHWMRQLVSF 176

  Fly   300 DKLKLTNNQLDENGHIILNSMHRYQPRFHLVYLPPKNASLDENEHSSHFRTFIFPETSFTAVTAY 364
            .|||||||.||..|||||||||:||||.|:|.....||...:|   :.|.|.:||||||.:||:|
  Rat   177 QKLKLTNNHLDPFGHIILNSMHKYQPRLHIVKADENNAFGSKN---TAFCTHVFPETSFISVTSY 238

  Fly   365 QNQRVTQLKISSNPFAKGFRDDGTNDVTTGGGSSMSSMSHESQARMKQQQQQQQQQQQQLQQQQQ 429
            ||.::|||||.:||||||||  |::|               |..|:.:.|.:             
  Rat   239 QNHKITQLKIENNPFAKGFR--GSDD---------------SDLRVARLQSK------------- 273

  Fly   430 QQQQLKERTAATSNFGLSCSELAIEQQQQQQQQQGVLQLPATPSSSSTSGNSPDLLGYQMEQQLQ 494
                                |..:..:...:|:....||.|.|..|..                 
  Rat   274 --------------------EYPVISKSIMRQRLVSSQLSAKPDVSPL----------------- 301

  Fly   495 QQHQQQQQQQHQSQQQHLHQQHQANQQQSL-LQQSQNHTQYGSYHHAYQAQV-----------QS 547
              |...|..||...:...|.|..|.:.|.| |...........::|..:.:.           :|
  Rat   302 --HSTHQALQHYQYENGAHMQFAAAEPQDLPLNTFPTQRDSSLFYHCLKRRADSARHLDLPCKRS 364

  Fly   548 HPLTPHSSSS----ASPP----ATAAPG-ASAATAAVA-----GGAGAAGAGGATSATQVMSAAN 598
            :..||.|...    .|||    ...:|. .|..|...|     .|...||............:.|
  Rat   365 YLETPSSVGDDHYFRSPPPYDQQMLSPSYCSEVTPREACMYSSSGPEIAGVSAVDDLPPPPLSCN 429

  Fly   599 IYSSIGQ------------PYAQEQSNFGA-IYHHNAAAAAAAHYHHGHAHGHAH---SHAHAHA 647
            :::|:..            ||....::|.| ........||.:....|:||...:   |.:....
  Rat   430 MWTSVSPYTSYSVQTMETVPYQPFPTHFTATTMMPRLPIAAQSAQPPGNAHFSVYNQLSQSQVRE 494

  Fly   648 HGPYAS 653
            .||.||
  Rat   495 RGPSAS 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
org-1NP_001285019.1 TBOX 195..389 CDD:238106 110/193 (57%)
Tbx4XP_006247098.1 TBOX 74..263 CDD:238106 114/225 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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