DRSC/TRiP Functional Genomics Resources

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Protein Alignment org-1 and Tbx4

DIOPT Version :10

Sequence 1:NP_511085.2 Gene:org-1 / 31778 FlyBaseID:FBgn0021767 Length:699 Species:Drosophila melanogaster
Sequence 2:XP_006247098.1 Gene:Tbx4 / 303399 RGDID:1309057 Length:555 Species:Rattus norvegicus


Alignment Length:591 Identity:178/591 - (30%)
Similarity:253/591 - (42%) Gaps:152/591 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 PDQSSSSSSSSVSLPTDYAGVHSEASMA-PTAGGTAVTTTSAGGVSASTASKKFKGQHKKDNNSA 169
            |....:|:|::.::|        |.::| |...|||:::....|...:.|:            :|
  Rat    19 PALGETSNSNNTNVP--------EPALATPGLSGTALSSPPGQGADVAAAA------------AA 63

  Fly   170 ENGTVKPNSHNISKGESEPVHPSLAQAIVVLETKALWDQFHAQGTEMIITKTGRRMFPTFQVRIG 234
            .....:....||..|               |..|.||.:||..||||||||.||||||:::|::.
  Rat    64 AAAAAEQTIENIKVG---------------LHEKELWKKFHEAGTEMIITKAGRRMFPSYKVKVT 113

  Fly   235 GLDPHATYICMMDFVPMDDKRYRYAFHNSCWVVAGKADPISPPRIHVHPDSPAVGSNWMKQIVSF 299
            |::|...||.::|.||.||  :||.|.::.|:|||||:|..|.|::|||||||.|::||:|:|||
  Rat   114 GMNPKTKYILLIDIVPADD--HRYKFCDNKWMVAGKAEPAMPGRLYVHPDSPATGAHWMRQLVSF 176

  Fly   300 DKLKLTNNQLDENGHIILNSMHRYQPRFHLVYLPPKNASLDENEHSSHFRTFIFPETSFTAVTAY 364
            .|||||||.||..|||||||||:||||.|:|.....||...:|   :.|.|.:||||||.:||:|
  Rat   177 QKLKLTNNHLDPFGHIILNSMHKYQPRLHIVKADENNAFGSKN---TAFCTHVFPETSFISVTSY 238

  Fly   365 QNQRVTQLKISSNPFAKGFRDDGTNDVTTGGGSSMSSMSHESQARMKQQQQQQQQQQQQLQQQQQ 429
            ||.::|||||.:||||||||  |::|               |..|:.:.|.:             
  Rat   239 QNHKITQLKIENNPFAKGFR--GSDD---------------SDLRVARLQSK------------- 273

  Fly   430 QQQQLKERTAATSNFGLSCSELAIEQQQQQQQQQGVLQLPATPSSSSTSGNSPDLLGYQMEQQLQ 494
                                |..:..:...:|:....||.|.|..|..                 
  Rat   274 --------------------EYPVISKSIMRQRLVSSQLSAKPDVSPL----------------- 301

  Fly   495 QQHQQQQQQQHQSQQQHLHQQHQANQQQSL-LQQSQNHTQYGSYHHAYQAQV-----------QS 547
              |...|..||...:...|.|..|.:.|.| |...........::|..:.:.           :|
  Rat   302 --HSTHQALQHYQYENGAHMQFAAAEPQDLPLNTFPTQRDSSLFYHCLKRRADSARHLDLPCKRS 364

  Fly   548 HPLTPHSSSS----ASPP----ATAAPG-ASAATAAVA-----GGAGAAGAGGATSATQVMSAAN 598
            :..||.|...    .|||    ...:|. .|..|...|     .|...||............:.|
  Rat   365 YLETPSSVGDDHYFRSPPPYDQQMLSPSYCSEVTPREACMYSSSGPEIAGVSAVDDLPPPPLSCN 429

  Fly   599 IYSSIGQ------------PYAQEQSNFGA-IYHHNAAAAAAAHYHHGHAHGHAH---SHAHAHA 647
            :::|:..            ||....::|.| ........||.:....|:||...:   |.:....
  Rat   430 MWTSVSPYTSYSVQTMETVPYQPFPTHFTATTMMPRLPIAAQSAQPPGNAHFSVYNQLSQSQVRE 494

  Fly   648 HGPYAS 653
            .||.||
  Rat   495 RGPSAS 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
org-1NP_511085.2 T-box_TBX1_10-like 195..385 CDD:410313 108/189 (57%)
Tbx4XP_006247098.1 T-box_TBX4_5-like 75..259 CDD:410315 111/205 (54%)

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