DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment org-1 and Tbx2

DIOPT Version :10

Sequence 1:NP_511085.2 Gene:org-1 / 31778 FlyBaseID:FBgn0021767 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_001388735.1 Gene:Tbx2 / 303398 RGDID:1311014 Length:711 Species:Rattus norvegicus


Alignment Length:629 Identity:203/629 - (32%)
Similarity:272/629 - (43%) Gaps:147/629 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 PTAGGTAVTTTSAGGVSASTASKKFKGQHKKDNNSAENGTVKPNSHNISKGESEPVHPSLAQAIV 198
            |...|.|....:|...:.:.......|.|            .|.:|..|....||.........|
  Rat    55 PGLAGAAAAAAAAAAAAEAGLHVSALGPH------------PPAAHLRSLKSLEPEDEVEDDPKV 107

  Fly   199 VLETKALWDQFHAQGTEMIITKTGRRMFPTFQVRIGGLDPHATYICMMDFVPMDDKRYRYAFHNS 263
            .||.|.||||||..||||:|||:||||||.|:||:.|||..|.||.:||.|..||.||:  ||||
  Rat   108 TLEAKELWDQFHKLGTEMVITKSGRRMFPPFKVRVSGLDKKAKYILLMDIVAADDCRYK--FHNS 170

  Fly   264 CWVVAGKADPISPPRIHVHPDSPAVGSNWMKQIVSFDKLKLTNNQLDENGHIILNSMHRYQPRFH 328
            .|:|||||||..|.|:::||||||.|..||.:.|:|.|||||||..|::|..||||||:||||||
  Rat   171 RWMVAGKADPEMPKRMYIHPDSPATGEQWMAKPVAFHKLKLTNNISDKHGFTILNSMHKYQPRFH 235

  Fly   329 LV------YLPPKNASLDENEHSSHFRTFIFPETSFTAVTAYQNQRVTQLKISSNPFAKGFRDDG 387
            :|      .||           .|.|||::||||.|.|||||||.::|||||.:|||||||||.|
  Rat   236 IVRANDILKLP-----------YSTFRTYVFPETDFIAVTAYQNDKITQLKIDNNPFAKGFRDTG 289

  Fly   388 T------NDVT--------------TGGGSSMSSMSHESQAR------------MKQQQQQQQQQ 420
            .      ..:|              ..|..|.:|......||            ::..:.:.:::
  Rat   290 NGRREKRKQLTLPTLRLYEEHCKPERDGAESDASSCDPPPAREPPPSPSAAPSPLRLHRARAEEK 354

  Fly   421 QQQLQQQQQQQQQLKERTAATSNFGLSCSELAIEQQQQQQQQQGVLQLPATPSSSSTSGNSP--- 482
            ........:.::..:||.||.  .|.|.|..|...:..:.::....:.|...|...|.|...   
  Rat   355 PCAADSDPEPERSGEERAAAP--LGRSSSRDASPARLTEPERSRERRSPERGSKEPTEGGGDGPF 417

  Fly   483 DLLGYQMEQQLQQQHQQQQQQQHQSQQQHLHQQHQANQQQSLLQQSQNHTQYGSYH--------H 539
            .|...:.|:...::..:.::...:.::..|         ..|:.|:.:.:..|:.|        |
  Rat   418 SLRSLEKERAEARRKDEGRKDVGEGKEPSL---------APLVVQTDSASPLGAGHLPGLAFSSH 473

  Fly   540 AYQAQV-----QSHPLTPHSSSSA-SPPATAAPGASAATAAVAGGAGAAG-----------AGGA 587
            .:..|.     ...||..|....| .|.|.:|.|.....|:||||.|.:|           |||.
  Rat   474 LHGQQFFGPLGAGQPLFLHPGQFAMGPGAFSAMGMGHLLASVAGGGGNSGGAAPGTAAGLDAGGL 538

  Fly   588 TSATQVMSAA---------NIYSSIGQPYAQEQSNFGAI----YHHNAAAAAAAHYHHGHAHGHA 639
            ..|....|.|         ::.:|.|.|    ...||.:    |.:.|||||||           
  Rat   539 GPAASAASTATPFPFHLSQHMLASQGIP----MPTFGGLFPYPYTYMAAAAAAA----------- 588

  Fly   640 HSHAHAHAHGPYASAYDKLKVSRHAAAAAYGMGATYPS-FYGSA 682
                            ..|..:..|||||...|:...| |.|||
  Rat   589 ----------------SALPATSAAAAAAAAAGSLSRSPFLGSA 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
org-1NP_511085.2 T-box_TBX1_10-like 195..385 CDD:410313 116/195 (59%)
Tbx2NP_001388735.1 T-box_TBX2_3-like 103..287 CDD:410314 116/196 (59%)
TBX 305..379 CDD:432659 10/75 (13%)

Return to query results.
Submit another query.