DRSC/TRiP Functional Genomics Resources

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Protein Alignment org-1 and tbx16

DIOPT Version :9

Sequence 1:NP_001285019.1 Gene:org-1 / 31778 FlyBaseID:FBgn0021767 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_571133.1 Gene:tbx16 / 30264 ZFINID:ZDB-GENE-990615-5 Length:470 Species:Danio rerio


Alignment Length:498 Identity:176/498 - (35%)
Similarity:245/498 - (49%) Gaps:79/498 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 VKPNSHNISKGESEPVHPSLAQA---------IVVLETKALWDQFHAQGTEMIITKTGRRMFPTF 229
            ::...||.|.    |..||:..|         .:.||...||..||..||||||||.||||||..
Zfish     4 IRDLKHNFSL----PPPPSMPGAGDSYHQGNIRMTLEDPELWRSFHEIGTEMIITKPGRRMFPHC 64

  Fly   230 QVRIGGLDPHATYICMMDFVPMDDKRYRYAFHNSCWVVAGKADPISPPRIHVHPDSPAVGSNWMK 294
            ::.:.||.|:|.||.::|.||.|..||::  :...|.|||||:|..|.|.::||||||.||:|||
Zfish    65 KISLSGLVPYAKYILLVDMVPEDGLRYKW--NKDKWEVAGKAEPQPPYRTYLHPDSPAPGSHWMK 127

  Fly   295 QIVSFDKLKLTNNQLDENGHIILNSMHRYQPRFHLVYLPPKNASLDE--NEHSSHFRTFIFPETS 357
            |.|||.|||||||.||::|||||:|||||.||||:|       ..|:  :...|.|:||.|||||
Zfish   128 QPVSFLKLKLTNNALDQHGHIILHSMHRYHPRFHIV-------QADDLYSVRWSVFQTFTFPETS 185

  Fly   358 FTAVTAYQNQRVTQLKISSNPFAKGFRDDGTNDVTTGGGS------SMSSMSHESQARMKQQQQQ 416
            |||||||||.::|:|||..|||||||||:|||.......:      ....||.:|:  ....|..
Zfish   186 FTAVTAYQNTKITKLKIDHNPFAKGFRDEGTNSKRRANRNLPDPERVAKKMSKDSE--HGSPQDV 248

  Fly   417 QQQQQQQLQQQQQQQQQLKERTAATSNFGLSCSELAIEQQQQQQQQQGVLQLPATPSSSSTSGNS 481
            |....:.|..:...:::|:.:....|.:|.:|           .:..|....|.:|..|    :.
Zfish   249 QPSSCEALDDEHAGRKELEVKAERYSPWGGAC-----------DRDSGHALRPESPLGS----DH 298

  Fly   482 PDLLGYQMEQQLQQQHQQQQQQQHQSQQQHLHQQHQANQQQSLLQQSQNHTQYGSYHHAYQAQVQ 546
            .|:  |..||.:..|:..|..:.|:      :.:..:....|.:..|......|  ..:::::|.
Zfish   299 RDV--YSSEQLVPGQNTYQPYRFHE------YGKSPSPSSSSSVGGSSACGSAG--RPSFESRVL 353

  Fly   547 SHPLTPHSSSSASPPATAAPGASAATAAVAGGAGAAGA--GGATSATQVMSAAN-IYSSIGQPYA 608
            .....|.:.||:.|  ::||..|......||....||.  ...|.|...|...: :||.    |:
Zfish   354 DVATVPDTDSSSKP--SSAPEFSLPPHPSAGHQEYAGVLNMAITQAKPGMLGTHPLYSH----YS 412

  Fly   609 QEQSN---FGAI----------YHHNAAAAAAAHYHHGHAHGH 638
            .|||.   .||.          :||.....::...|||:.||:
Zfish   413 TEQSLGQWSGAAASQYPPPPPPHHHLPTEYSSQAVHHGYHHGN 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
org-1NP_001285019.1 TBOX 195..389 CDD:238106 114/204 (56%)
tbx16NP_571133.1 TBOX 30..217 CDD:238106 113/195 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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