DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment org-1 and Tbx15

DIOPT Version :9

Sequence 1:NP_001285019.1 Gene:org-1 / 31778 FlyBaseID:FBgn0021767 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_001382004.1 Gene:Tbx15 / 295315 RGDID:1308094 Length:602 Species:Rattus norvegicus


Alignment Length:618 Identity:192/618 - (31%)
Similarity:260/618 - (42%) Gaps:173/618 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 IEACIQTAGKDRSSYKPLEQIDAKLADIETHSTGSTGTANSNSSTSSISNPSCPDQSSSSSSSSV 117
            :||.|.:..|     :.|...:.|..|:...:...||........::......||...|:.|.|.
  Rat    20 VEALIGSNKK-----RKLRDWEEKGLDLSMEALSPTGPLGDTDDPATHGLEPHPDSEQSTGSDSE 79

  Fly   118 SLPTDYAGVHSEASMAPTAGGTAVTTTSAGGVSASTASKKFKGQHKKDNNSAENGTVKPNSHNIS 182
            .|        :|.:....:..|.:.:.:||.|..:.:                            
  Rat    80 VL--------TERTSCSFSAHTDLASGAAGSVPVAMS---------------------------- 108

  Fly   183 KGESEPVHPSLAQAIVVLETKALWDQFHAQGTEMIITKTGRRMFPTFQVRIGGLDPHATYICMMD 247
                     |:.:..|.|:...||.:||..||||||||.||||||..:|:|.|||||..|...||
  Rat   109 ---------SMEEIQVELQCADLWKRFHDIGTEMIITKAGRRMFPAMRVKITGLDPHQQYYIAMD 164

  Fly   248 FVPMDDKRYRYAFHNSCWVVAGKADPISPPRIHVHPDSPAVGSNWMKQIVSFDKLKLTNNQLDEN 312
            .||:|:|||||.:|:|.|:|||.||...|||:::||||.|.|..||:|:|||||||||||:||:.
  Rat   165 IVPVDNKRYRYVYHSSKWMVAGNADSPVPPRVYIHPDSLASGDTWMRQVVSFDKLKLTNNELDDQ 229

  Fly   313 GHIILNSMHRYQPRFHLV-------YLPPKNASLDENEHSSHFRTFIFPETSFTAVTAYQNQRVT 370
            |||||:|||:||||.|::       ..|.|...:.:.     .:||.||||.||.|||||||::|
  Rat   230 GHIILHSMHKYQPRVHVIRKDFSSDLSPTKPVPVGDG-----VKTFNFPETVFTTVTAYQNQQIT 289

  Fly   371 QLKISSNPFAKGFRDDGTNDVTTGGGSSMSSMSHESQARMKQQQQQQQQQQQQLQQQQQQQQQLK 435
            :|||..|||||||||.|.|  .||..:.|     |:.|..:.                      .
  Rat   290 RLKIDRNPFAKGFRDSGRN--RTGLEAIM-----ETYAFWRP----------------------P 325

  Fly   436 ERTAATSNFGLSCSELAIEQQQQQQQQQGVLQLPATPSSSSTSGNSPDLLGYQMEQQLQQQHQQQ 500
            .||            |..|.....|:|||. ....:||:|||...||                  
  Rat   326 VRT------------LTFEDFTTMQKQQGG-STGTSPSTSSTGTPSP------------------ 359

  Fly   501 QQQQHQSQQQHLHQQ-------HQA-NQQQSLLQQSQ----NHTQYGSYHHAYQAQVQSHP---- 549
                  |...||...       |.| |......::||    |.:.|.....:..|.:||:|    
  Rat   360 ------SASSHLLSPSCSPPTFHLAPNTFNVGCRESQLCNLNLSDYPPCARSNMAALQSYPGLSD 418

  Fly   550 -----LTPHSSSSASPPATAAPGASAATAAVAGG----------------AGAAGAGGATSATQV 593
                 |...::|:..|..|..|   ..|.::..|                .|..|:...:....|
  Rat   419 SGYNRLQSGTASATQPSETFMP---QRTPSLISGIPTPPSLPSNSKMEAYGGQLGSFPTSQFQYV 480

  Fly   594 MSAANIYSSIGQPYA-----QEQSNFGAIYHHN 621
            |.|.|..||...|:.     .:||::.|...||
  Rat   481 MQAGNAASSSSSPHMFGGSHMQQSSYNAFSLHN 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
org-1NP_001285019.1 TBOX 195..389 CDD:238106 115/200 (58%)
Tbx15NP_001382004.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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