DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment org-1 and Tbx4

DIOPT Version :9

Sequence 1:NP_001285019.1 Gene:org-1 / 31778 FlyBaseID:FBgn0021767 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_035666.2 Gene:Tbx4 / 21387 MGIID:102556 Length:552 Species:Mus musculus


Alignment Length:591 Identity:172/591 - (29%)
Similarity:249/591 - (42%) Gaps:155/591 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 PDQSSSSSSSSVSLPTDYAGVHSEASMA-PTAGGTAVTTTSAGGVSASTASKKFKGQHKKDNNSA 169
            |....:|::|:.:.|        |.::| |...|.|:::....|...:.|:.           :|
Mouse    19 PALGEASNTSTTNAP--------EPALATPGLSGAALSSPPGQGADVAAAAA-----------AA 64

  Fly   170 ENGTVKPNSHNISKGESEPVHPSLAQAIVVLETKALWDQFHAQGTEMIITKTGRRMFPTFQVRIG 234
            ...|::    ||..|               |..|.||.:||..||||||||.||||||:::|::.
Mouse    65 AEQTIE----NIKVG---------------LHEKELWKKFHEAGTEMIITKAGRRMFPSYKVKVT 110

  Fly   235 GLDPHATYICMMDFVPMDDKRYRYAFHNSCWVVAGKADPISPPRIHVHPDSPAVGSNWMKQIVSF 299
            |::|...||.::|.||.||  :||.|.::.|:|||||:|..|.|::|||||||.|::||:|:|||
Mouse   111 GMNPKTKYILLIDIVPADD--HRYKFCDNKWMVAGKAEPAMPGRLYVHPDSPATGAHWMRQLVSF 173

  Fly   300 DKLKLTNNQLDENGHIILNSMHRYQPRFHLVYLPPKNASLDENEHSSHFRTFIFPETSFTAVTAY 364
            .|||||||.||..|||||||||:||||.|:|.....||...:|   :.|.|.:||||||.:||:|
Mouse   174 QKLKLTNNHLDPFGHIILNSMHKYQPRLHIVKADENNAFGSKN---TAFCTHVFPETSFISVTSY 235

  Fly   365 QNQRVTQLKISSNPFAKGFRDDGTNDVTTGGGSSMSSMSHESQARMKQQQQQQQQQQQQLQQQQQ 429
            ||.::|||||.:||||||||  |::|               |..|:.:.|.:             
Mouse   236 QNHKITQLKIENNPFAKGFR--GSDD---------------SDLRVARLQSK------------- 270

  Fly   430 QQQQLKERTAATSNFGLSCSELAIEQQQQQQQQQGVLQLPATPSSSSTSGNSPDLLGYQMEQQLQ 494
                                |..:..:...:|:....||.|.|..|..                 
Mouse   271 --------------------EYPVISKSIMRQRLVSSQLSAKPDVSPL----------------- 298

  Fly   495 QQHQQQQQQQHQSQQQHLHQQHQANQQQSL-LQQSQNHTQYGSYHHAYQAQVQSHPL-------- 550
              |...|..||...:...|.|..|.:.|.| |...........::|..:.:..:..|        
Mouse   299 --HSAHQALQHYQYENGAHMQFAAAEPQDLPLNTFPTQRDSSLFYHCLKRRDSARHLDLPCKRSY 361

  Fly   551 ----------------TPHSSSSASPPATAAPGASAATAAVAGGAGAAGAGGATSATQVMSAANI 599
                            .|:.....||...:......|....:.|...||............:.|:
Mouse   362 LETPSSVGDDHYFRSPPPYDQQMLSPSYCSEVTPREACMYSSSGPEIAGVSAVDDLPPPPLSCNM 426

  Fly   600 YSSIGQ------------PYAQEQSNFGA--IYHHNAAAAAAAHYHHGHAHGHAH---SHAHAHA 647
            ::|:..            ||....::|.|  :.......||.:....|:||...:   |.:....
Mouse   427 WTSVSPYTSYSVQTMETVPYQPFPAHFTATTVMPRLPTIAAQSAQPPGNAHFSVYNQLSQSQVRE 491

  Fly   648 HGPYAS 653
            .||.||
Mouse   492 RGPSAS 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
org-1NP_001285019.1 TBOX 195..389 CDD:238106 110/193 (57%)
Tbx4NP_035666.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..50 9/38 (24%)
TBOX 71..260 CDD:238106 114/225 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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