DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment org-1 and Tbr1

DIOPT Version :9

Sequence 1:NP_001285019.1 Gene:org-1 / 31778 FlyBaseID:FBgn0021767 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_033348.2 Gene:Tbr1 / 21375 MGIID:107404 Length:681 Species:Mus musculus


Alignment Length:436 Identity:139/436 - (31%)
Similarity:193/436 - (44%) Gaps:94/436 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTHLMGPTECAGAMMTTTSMQFLDTSLTDYNCYGNDYWTSPYMTGGLSPMKQIEACIQTAGK-DR 64
            :.|.:.|:       ...|.:||:.|        :.|   |: :||...:......|.|... :|
Mouse     3 LEHCLSPS-------IMLSKKFLNVS--------SSY---PH-SGGSELVLHDHPIISTTDNLER 48

  Fly    65 SSYKPLEQIDAKLADIETHSTGSTGTANSNSSTSSISNP------------------------SC 105
            ||  ||::|          :.|.|..:::::...|..:|                        |.
Mouse    49 SS--PLKKI----------TRGMTNQSDTDNFPDSKDSPGDVQRSKLSPVLDGVSELRHSFDGSA 101

  Fly   106 PDQSSSSSSSSVSLPTDYAGVHSEASMAPTAGGTAVTTTSAGGVSASTASKKFKGQHKKDNNSAE 170
            .|:...|.||.   |...|...|.....|:..|.|....|.|..|      ::...|....|.|.
Mouse   102 ADRYLLSQSSQ---PQSAATAPSAMFPYPSQHGPAHPAFSIGSPS------RYMAHHPVITNGAY 157

  Fly   171 NGTVKPNS----------------HNISKG---ESEPVHPSL--AQAIVVLETKALWDQFHAQGT 214
            |..:..:|                |:....   :.....|.|  .:|.|.|..:.||.:||...|
Mouse   158 NSLLSNSSPQGYPTAGYPYPQQYGHSYQGAPFYQFSSTQPGLVPGKAQVYLCNRPLWLKFHRHQT 222

  Fly   215 EMIITKTGRRMFPTFQVRIGGLDPHATYICMMDFVPMDDKRYRYAFHNSCWVVAGKADP-ISPPR 278
            ||||||.||||||.....|.||||.|.|...:|.:..|...:|  |....||..||||. :...|
Mouse   223 EMIITKQGRRMFPFLSFNISGLDPTAHYNIFVDVILADPNHWR--FQGGKWVPCGKADTNVQGNR 285

  Fly   279 IHVHPDSPAVGSNWMKQIVSFDKLKLTNNQ--LDENGH-IILNSMHRYQPRFHLVYLPPKNASLD 340
            :::|||||..|::||:|.:||.|||||||:  .:.||. ::|.|:|:||||.|:|.:  .....:
Mouse   286 VYMHPDSPNTGAHWMRQEISFGKLKLTNNKGASNNNGQMVVLQSLHKYQPRLHVVEV--NEDGTE 348

  Fly   341 ENEHSSHFRTFIFPETSFTAVTAYQNQRVTQLKISSNPFAKGFRDD 386
            :.......:||.||||.|.|||||||..:|||||..|||||||||:
Mouse   349 DTSQPGRVQTFTFPETQFIAVTAYQNTDITQLKIDHNPFAKGFRDN 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
org-1NP_001285019.1 TBOX 195..389 CDD:238106 95/196 (48%)
Tbr1NP_033348.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 43..83 10/51 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 108..127 6/21 (29%)
TBOX 203..396 CDD:238106 95/196 (48%)
T-box_assoc 418..679 CDD:374412
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 447..483
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 597..655
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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