DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment org-1 and tbx6

DIOPT Version :9

Sequence 1:NP_001285019.1 Gene:org-1 / 31778 FlyBaseID:FBgn0021767 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_705952.2 Gene:tbx6 / 192294 ZFINID:ZDB-GENE-020416-5 Length:874 Species:Danio rerio


Alignment Length:523 Identity:148/523 - (28%)
Similarity:217/523 - (41%) Gaps:114/523 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 VKPNSHNISKGESEPVHPSLAQAIV--VLETKALWDQFHAQGTEMIITKTGRRMFPTFQVRIGGL 236
            :||:::..|        |:..|..|  .||...||.||...|||||:||.||||||..:|::.||
Zfish    46 LKPHANTDS--------PATPQDSVRMELENAGLWKQFSTVGTEMIVTKKGRRMFPQLRVKLSGL 102

  Fly   237 DPHATYICMMDFVPMDDKRYRYAFHNSCWVVAGKADPISPPRIHVHPDSPAVGSNWMKQIVSFDK 301
            :|...||.::|.||:|..|||  |.::.|.|.|.|:...|.|:.:||||||.|.:|..:.:||.:
Zfish   103 NPSLRYILLLDIVPVDSSRYR--FQDNSWQVVGGAEARLPDRVFIHPDSPATGEHWQNRTISFHR 165

  Fly   302 LKLTNNQLDENGHIILNSMHRYQPRFHLVYLPPKNASL-DENEHSSHFRTFIFPETSFTAVTAYQ 365
            .|||||.||..|:|||:|:||||||.|::  ..::..: ...:||     |.||||.|..|||||
Zfish   166 AKLTNNTLDAQGYIILHSLHRYQPRVHVI--EARDVLMWGRTQHS-----FTFPETQFITVTAYQ 223

  Fly   366 NQRVTQLKISSNPFAKGFRDDGTNDVTTGGGSSMSSMSHESQARMKQQQQQQQQQQQQLQ----- 425
            |.::|:|||:|||||||||::|.|            ...:.:||:|::....|::...::     
Zfish   224 NNKITELKINSNPFAKGFRENGMN------------CKKQREARLKRKITSSQEECLDIESCDPC 276

  Fly   426 ---QQQQQQQQLKERTAATSNFGLSCSE-------------------LAIEQ--------QQQQQ 460
               :...|...|........|..|..::                   |.:||        ...:.
Zfish   277 DSTELLPQSVDLPSSALTIMNTALPITDSGFHTEVSSHPDQTDSDQTLVLEQAFLTSEMPSSMES 341

  Fly   461 QQQGVLQLPATPSSSSTSGNSPDLLGYQMEQQLQQQHQQQQQQQHQS----------------QQ 509
            |||...:.....:....:|...||.||.......|........|..|                |.
Zfish   342 QQQTTSETNVNNALMDETGQMMDLSGYTSSFPTPQLSSHTSVPQSSSMYSVVSSTQSSDLELPQA 406

  Fly   510 QHLHQQHQ----------------------------ANQQQSLLQQSQNH-TQYGSYHHAYQAQV 545
            ..:...|.                            ::...|:...:.:| .|..|||.......
Zfish   407 SSISSPHSMPAYSSIPSAEYPGVNSSTAMPASTTSLSDSYPSISHSTSSHLLQSSSYHSLLPTDQ 471

  Fly   546 QSHPLTPHSSSSASPPATAAPGASAATAAVAGGAGAAGAGGATSATQVMSAANIYSSIGQPYAQE 610
            ....|:||:.:  :||..:.|........:..|......||.:||.....|....:....|:...
Zfish   472 SQDNLSPHTPT--NPPFQSIPACQGTRLTIDSGQNQVDDGGLSSANATTPAVPNPTQTAFPFPPV 534

  Fly   611 QSN 613
            |.|
Zfish   535 QPN 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
org-1NP_001285019.1 TBOX 195..389 CDD:238106 98/196 (50%)
tbx6NP_705952.2 TBOX 62..247 CDD:238106 97/193 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 364..396 7/31 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 428..453 1/24 (4%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 466..551 15/74 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 563..626
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 664..695
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 720..776
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.