DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment org-1 and tbx-39

DIOPT Version :9

Sequence 1:NP_001285019.1 Gene:org-1 / 31778 FlyBaseID:FBgn0021767 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_502851.1 Gene:tbx-39 / 190678 WormBaseID:WBGene00006558 Length:396 Species:Caenorhabditis elegans


Alignment Length:402 Identity:88/402 - (21%)
Similarity:151/402 - (37%) Gaps:81/402 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 SLAQAIVVLETKALWDQFHAQGTEMIITKTGRRM-FPTFQVRIGGLDPHATYICMMDFVPMDDKR 255
            |.||..|.:..:..|.|:: ...|||:...|.:: ||.....|.||:..:.|:.::.....|:  
 Worm     3 SQAQFNVTMAEEDRWKQWY-PNMEMIVNNKGPKLIFPELNFNITGLEEKSRYVVLLSIEKYDN-- 64

  Fly   256 YRYAFHNSCWVVAGKADPISPPRIH------------VHPDSPAVGSNWMKQIVSFDKLKLTNNQ 308
            .||.:.|..|         .|.::.            :|||...:|...||:.:.||.:::||::
 Worm    65 IRYGYRNGKW---------GPSKVRHATKKEQEIKYFLHPDGTKLGKELMKETIKFDTVRITNHK 120

  Fly   309 --LDENGHIILNSMHRYQPRFHLVYLPPKN-ASLDENEHSSHFRTFIFPETSFTAVTAYQNQRVT 370
              :|::....:.:||:|.|     .|..|| .:::...||.....     ..|..||.|..:.:.
 Worm   121 KFMDKDNVFFVETMHKYVP-----VLTVKNITNVESANHSMRMEV-----AQFFPVTVYNQESIG 175

  Fly   371 QLKISSNPFAKGFRDDGTNDVTTGGGSSMSSMSHESQARMKQQQQQQQQQQQQLQQQQQQQQQLK 435
            ..|       ..|..:.|......||:...:.....:...|:.:.:.:.....:.|...|.:...
 Worm   176 NWK-------SKFHKNSTYGNRLDGGNKRKNTDSSEERTSKRSKNETEIAVSDILQVASQSENYN 233

  Fly   436 ERTAATSNFGLSCSELAIEQQQQQQQQQGVLQLPAT------PSSSSTSGNSPDLLGYQMEQQLQ 494
            |.|    |.|          :.|.:....:.|.|:|      |.:..|. |:|.:...|......
 Worm   234 EST----NSG----------RLQNEISSSIHQFPSTSYQNQYPHAYPTV-NTPPIYVQQFTALFD 283

  Fly   495 QQHQQ----QQQQQHQSQQQHLHQ--QHQANQQQSLLQ--------QSQNHTQYGSYHHAYQAQV 545
            :.|.|    .:|.:.....|:|..  |...||::::.|        |..|...||||.: |....
 Worm   284 EIHNQFDPKTKQNRVAKNVQYLSSVPQFAINQKENIHQNAPDYPVSQFPNQYPYGSYPY-YYPYF 347

  Fly   546 QSHPLTPHSSSS 557
            ||....||.:.|
 Worm   348 QSSQQFPHLNYS 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
org-1NP_001285019.1 TBOX 195..389 CDD:238106 46/209 (22%)
tbx-39NP_502851.1 T-box 9..180 CDD:279278 44/199 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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