DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment org-1 and mls-1

DIOPT Version :9

Sequence 1:NP_001285019.1 Gene:org-1 / 31778 FlyBaseID:FBgn0021767 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_498640.1 Gene:mls-1 / 186741 WormBaseID:WBGene00003376 Length:252 Species:Caenorhabditis elegans


Alignment Length:201 Identity:107/201 - (53%)
Similarity:135/201 - (67%) Gaps:13/201 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 VVLETKALWDQFHAQGTEMIITKTGRRMFPTFQVRIGGLDPHATYICMMDFVPMDDKRYRYAFHN 262
            |.|::..||.:||..|||||:||:|||||||..|.|.||||..:|:.|:|...::.||:||:||.
 Worm    33 VFLQSSNLWRRFHNLGTEMIVTKSGRRMFPTLSVIIAGLDPVKSYVVMVDLECIEMKRFRYSFHQ 97

  Fly   263 SCWVVAGKADPISPPRIHVHPDSPAVGSNWMKQIVSFDKLKLTNNQLDENGHIILNSMHRYQPRF 327
            |.|:..|..:...|.|:.||.||||.|::||:..|||||:||||||||.|||||:||||:|:||.
 Worm    98 SKWISTGPGESELPSRMFVHTDSPARGAHWMRAPVSFDKMKLTNNQLDNNGHIIVNSMHKYRPRV 162

  Fly   328 HLVYLPPKNASLDENEHSSHFRTFIFPETSFTAVTAYQNQRVTQLKISSNPFAKGFRD---DGTN 389
            |::          |.:.|....||.|.||.|.|||||||.|:|.|||.|||||||||:   .|..
 Worm   163 HII----------EQDDSQKRHTFSFEETEFIAVTAYQNHRITSLKIESNPFAKGFRECEVQGIE 217

  Fly   390 DVTTGG 395
            ..:.||
 Worm   218 MNSVGG 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
org-1NP_001285019.1 TBOX 195..389 CDD:238106 105/193 (54%)
mls-1NP_498640.1 TBOX 31..212 CDD:238106 104/188 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165729
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003320
OrthoInspector 1 1.000 - - oto20669
orthoMCL 1 0.900 - - OOG6_107409
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2837
SonicParanoid 1 1.000 - - X3735
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.670

Return to query results.
Submit another query.