DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment org-1 and tbx-38

DIOPT Version :9

Sequence 1:NP_001285019.1 Gene:org-1 / 31778 FlyBaseID:FBgn0021767 Length:699 Species:Drosophila melanogaster
Sequence 2:NP_499526.1 Gene:tbx-38 / 182861 WormBaseID:WBGene00006557 Length:303 Species:Caenorhabditis elegans


Alignment Length:328 Identity:91/328 - (27%)
Similarity:138/328 - (42%) Gaps:44/328 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 VVLETKALWDQFHAQGTEMIITKT-GRRMFPTFQVRIGGLDPHATYICMMDFVPMDDKRYRYAFH 261
            |.|.|..:|::|:.: ||||:|:. ||.:||.....|.||||.:.|...:....:|..:|:  |.
 Worm    12 VSLSTPEIWEEFYPK-TEMIVTRNRGRVIFPHLDYIIKGLDPGSLYSIYIHLERVDGIKYK--FD 73

  Fly   262 NSCWVVAGKADPISPPRIHVHPDSPAVGSNWMKQIVSFDKLKLTNN-QLDENGHIILNSMHRYQP 325
            ...|....|.|||.|.:...||.....|:.||.:.|||..:|:||| ::.:...|::.|||::.|
 Worm    74 AGEWKEFAKGDPILPIQYKEHPRGKRTGAEWMSEPVSFAHIKITNNPEIKDQKVILVQSMHKHIP 138

  Fly   326 RFHLVYLPPKNASLDENEHSSHFRTFIFPETSFTAVTAYQNQRVTQLKISSNPFAKGFRDDGTND 390
            ...:..:........|:.....||   ...|.|..||||||:.:..||:..|.||.|||.:|...
 Worm   139 VVTVKQVRHYKTGYQEDFSGEQFR---LEATEFMVVTAYQNEILKNLKVHHNKFASGFRSNGKRR 200

  Fly   391 VTTGGGSSMSSMSHESQ----ARMKQQQQQQQQQQQQLQQQQQQQQQLKERTAATSNFGLSCSEL 451
            :::...:|.:|....|:    ..:..|....||......|.....|..:.:.|:..|:.      
 Worm   201 LSSDSENSENSPPKRSKLVTPPTISPQIDLPQQTPYYFNQNFVAPQNYQPQFASAQNYN------ 259

  Fly   452 AIEQQQQQQQQQGVLQLPATPSSSSTSGNSPDLLGYQMEQQLQQQH-QQQQQQQHQSQQQHLHQQ 515
             .|.|...|                        |.:.|..|.|.:. .||||.....|.|.|..:
 Worm   260 -FEVQNNAQ------------------------LAWNMYYQKQYEFWWQQQQMMMPGQPQELKNE 299

  Fly   516 HQA 518
            .|:
 Worm   300 FQS 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
org-1NP_001285019.1 TBOX 195..389 CDD:238106 66/192 (34%)
tbx-38NP_499526.1 TBOX 9..199 CDD:238106 66/192 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.